RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 ARHGEF18Q6ZSZ5 1173 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 ERN2Q76MJ5 926 aaKnown RBP6.51□□□□□ -1.37
CD44-214ENST00000525211 GSTA5Q7RTV2 222 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 LYSMD3Q7Z3D4 306 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 HSD11B1LQ7Z5J1 315 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 TTC7BQ86TV6 843 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 KBTBD6Q86V97 674 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 CAND1Q86VP6 1230 aaKnown RBP6.51□□□□□ -1.37
CD44-214ENST00000525211 WDR5BQ86VZ2 330 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 TMEFF1Q8IYR6 380 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 CCDC89Q8N998 374 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 OR14C36Q8NHC7 312 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 GANCQ8TET4 914 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 NAT14Q8WUY8 206 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 EXOC4Q96A65 974 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 FAM122AQ96E09 287 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 TUBGCP5Q96RT8 1024 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 NAP1L3Q99457 506 aaPredicted RBP6.51□□□□□ -1.37
CD44-214ENST00000525211 AGAP2Q99490 1192 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 VAT1Q99536 393 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 MYOCQ99972 504 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 TBL1YQ9BQ87 522 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 WRAP53Q9BUR4 548 aaKnown RBP6.51□□□□□ -1.37
CD44-214ENST00000525211 HDAC8Q9BY41 377 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 ATP13A3Q9H7F0 1226 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 FZD3Q9NPG1 666 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 CASS4Q9NQ75 786 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 FSCN3Q9NQT6 498 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 PAK5Q9P286 719 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 BCCIPQ9P287 314 aaKnown RBP eCLIP6.51□□□□□ -1.37
CD44-214ENST00000525211 DKK3Q9UBP4 350 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 RNF14Q9UBS8 474 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 SLC2A6Q9UGQ3 507 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.51□□□□□ -1.37
CD44-214ENST00000525211 DOLKQ9UPQ8 538 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 SHOC2Q9UQ13 582 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 PPIL1Q9Y3C6 166 aa6.51□□□□□ -1.37
CD44-214ENST00000525211 V9GYY5 206 aaPredicted RBP6.51□□□□□ -1.37
CD44-214ENST00000525211 A0A0J9YYE9 177 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.5□□□□□ -1.37
CD44-214ENST00000525211 A0A1W2PQU0 124 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 C1QTNF3-AMACRE9PGA6 284 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 CCDC188H7C350 402 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 K7ESM1 405 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 PLRG1O43660 514 aaKnown RBP6.5□□□□□ -1.37
CD44-214ENST00000525211 RNGTTO60942 597 aaKnown RBP6.5□□□□□ -1.37
CD44-214ENST00000525211 LILRB5O75023 590 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 SOCS5O75159 536 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 SUN1O94901 812 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 AP2A1O95782 977 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 NDST3O95803 873 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 TRBC1P01850 177 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 DNTTP04053 509 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 WNT1P04628 370 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 APRTP07741 180 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 RHOXF2BP0C7M4 288 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 MYBL2P10244 700 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 MGAT1P26572 445 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 SERPINA4P29622 427 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 ECHS1P30084 290 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 HOXA6P31267 233 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 FDFT1P37268 417 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 MMP12P39900 470 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 PTGER3P43115 390 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 MAGEA6P43360 314 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 MAGEA9P43362 315 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 CARSP49589 748 aaKnown RBP6.5□□□□□ -1.37
CD44-214ENST00000525211 ARSDP51689 593 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 NEK3P51956 506 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 ITGA8P53708 1063 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 GEMP55040 296 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 CLDN2P57739 230 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 SESN2P58004 480 aaPredicted RBP6.5□□□□□ -1.37
CD44-214ENST00000525211 FAM193AP78312 1265 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 ELOAQ14241 798 aaKnown RBP6.5□□□□□ -1.37
CD44-214ENST00000525211 FASTKD3Q14CZ7 662 aaKnown RBP6.5□□□□□ -1.37
CD44-214ENST00000525211 PPP1R7Q15435 360 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 CCDC6Q16204 474 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 ZNF284Q2VY69 593 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 TMEM52BQ4KMG9 183 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 CRTC2Q53ET0 693 aaPredicted RBP6.5□□□□□ -1.37
CD44-214ENST00000525211 OXLD1Q5BKU9 147 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 HP1BP3Q5SSJ5 553 aaPredicted RBP6.5□□□□□ -1.37
CD44-214ENST00000525211 ARMC12Q5T9G4 340 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 IZUMO3Q5VZ72 239 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 HIBCHQ6NVY1 386 aaPredicted RBP6.5□□□□□ -1.37
CD44-214ENST00000525211 CES3Q6UWW8 571 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 DPPA4Q7L190 304 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 ARMCX6Q7L4S7 300 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 GSPT2Q8IYD1 628 aaKnown RBP6.5□□□□□ -1.37
CD44-214ENST00000525211 CAMKK1Q8N5S9 505 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 PLA2G15Q8NCC3 412 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 ZBTB44Q8NCP5 570 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 OR13C4Q8NGS5 318 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 FEM1CQ96JP0 617 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 COQ10AQ96MF6 247 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 ZNF641Q96N77 438 aaPredicted RBP6.5□□□□□ -1.37
CD44-214ENST00000525211 MCCC1Q96RQ3 725 aaPredicted RBP6.5□□□□□ -1.37
CD44-214ENST00000525211 OMDQ99983 421 aa6.5□□□□□ -1.37
CD44-214ENST00000525211 RHOXF2Q9BQY4 288 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms