RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 NEK3P51956 506 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 CDK18Q07002 472 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 NSUN2Q08J23 767 aaKnown RBP eCLIP7.13□□□□□ -1.27
VPS11-201ENST00000524454 POLD3Q15054 466 aaPredicted RBP7.13□□□□□ -1.27
VPS11-201ENST00000524454 FAM133BQ5BKY9 247 aaKnown RBP7.13□□□□□ -1.27
VPS11-201ENST00000524454 PCID2Q5JVF3 399 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 FAXCQ5TGI0 409 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 KIAA0930Q6ICG6 404 aaPredicted RBP7.13□□□□□ -1.27
VPS11-201ENST00000524454 RANBP10Q6VN20 620 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 KYAT3Q6YP21 454 aaKnown RBP7.13□□□□□ -1.27
VPS11-201ENST00000524454 PRR23BQ6ZRT6 265 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 CPLX4Q7Z7G2 160 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 BPHLQ86WA6 291 aaPredicted RBP7.13□□□□□ -1.27
VPS11-201ENST00000524454 ETFBKMTQ8IXQ9 262 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 CACNA2D3Q8IZS8 1091 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 PHTF2Q8N3S3 785 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 DCLK2Q8N568 766 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 DNAAF3Q8N9W5 541 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.13□□□□□ -1.27
VPS11-201ENST00000524454 SNIP1Q8TAD8 396 aaKnown RBP7.13□□□□□ -1.27
VPS11-201ENST00000524454 USP33Q8TEY7 942 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 RPRD1AQ96P16 312 aaPredicted RBP7.13□□□□□ -1.27
VPS11-201ENST00000524454 PSKH2Q96QS6 385 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 TBL1YQ9BQ87 522 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 MCMBPQ9BTE3 642 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 TPSD1Q9BZJ3 242 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 POLR1EQ9GZS1 481 aaKnown RBP7.13□□□□□ -1.27
VPS11-201ENST00000524454 SP110Q9HB58 689 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 PDFQ9HBH1 243 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 PPANQ9NQ55 473 aaKnown RBP7.13□□□□□ -1.27
VPS11-201ENST00000524454 ZSCAN32Q9NX65 697 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 SEPT10Q9P0V9 454 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.13□□□□□ -1.27
VPS11-201ENST00000524454 ZFATQ9P243 1243 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 TXNDC16Q9P2K2 825 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 TBK1Q9UHD2 729 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 HCN2Q9UL51 889 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 CLEC4EQ9ULY5 219 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 SLC8A2Q9UPR5 921 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 INVSQ9Y283 1065 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 STARD13Q9Y3M8 1113 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 MAD1L1Q9Y6D9 718 aa7.13□□□□□ -1.27
VPS11-201ENST00000524454 ZCWPW2A0A1B0GU75 182 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 HEATR9A2RTY3 570 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 TYW5A2RUC4 315 aaKnown RBP7.12□□□□□ -1.27
VPS11-201ENST00000524454 TBC1D3BA6NDS4 549 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 PRRT4C9JH25 899 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 HOXC11O43248 304 aaPredicted RBP7.12□□□□□ -1.27
VPS11-201ENST00000524454 BANF1O75531 89 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 NEBLO76041 1014 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 SNUPNO95149 360 aaKnown RBP7.12□□□□□ -1.27
VPS11-201ENST00000524454 TGDSO95455 350 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 MOCS2O96007 188 aaPredicted RBP7.12□□□□□ -1.27
VPS11-201ENST00000524454 APODP05090 189 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 FGF1P05230 155 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 HNRNPLP14866 589 aaKnown RBP eCLIP7.12□□□□□ -1.27
VPS11-201ENST00000524454 ADRA1DP25100 572 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 PSMA3P25788 255 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 MGAT1P26572 445 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 OR1E1P30953 314 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 CRHR1P34998 444 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 ETV4P43268 484 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 CCT5P48643 541 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 NUMBP49757 651 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 LIMK2P53671 638 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 SLC12A1Q13621 1099 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 MPP2Q14168 576 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 DMC1Q14565 340 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 LAPTM4AQ15012 233 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 ZNF528Q3MIS6 628 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 ANKRD20A4Q4UJ75 823 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 INO80DQ53TQ3 878 aaPredicted RBP7.12□□□□□ -1.27
VPS11-201ENST00000524454 EGFLAMQ63HQ2 1017 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 RAP1GAP2Q684P5 730 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 GRAMD4Q6IC98 578 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 CASC4Q6P4E1 433 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 RFWD3Q6PCD5 774 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 ZC3H14Q6PJT7 736 aaKnown RBP7.12□□□□□ -1.27
VPS11-201ENST00000524454 KDELC1Q6UW63 502 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 C6orf89Q6UWU4 347 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 C14orf80Q86SX3 495 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 CTAGE3PQ8IX95 158 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 CPXM2Q8N436 756 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 PPM1NQ8N819 430 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 SUMF1Q8NBK3 374 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 TXNDC5Q8NBS9 432 aaKnown RBP7.12□□□□□ -1.27
VPS11-201ENST00000524454 HJURPQ8NCD3 748 aaPredicted RBP7.12□□□□□ -1.27
VPS11-201ENST00000524454 ZBTB44Q8NCP5 570 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 CCDC197Q8NCU1 140 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 PPHLN1Q8NEY8 458 aaKnown RBP7.12□□□□□ -1.27
VPS11-201ENST00000524454 MDM1Q8TC05 714 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 CALML6Q8TD86 181 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 NELL1Q92832 810 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 OTUB2Q96DC9 234 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 MYEOVQ96EZ4 313 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 CFAP36Q96G28 342 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 CELF6Q96J87 481 aaKnown RBP7.12□□□□□ -1.27
VPS11-201ENST00000524454 FEM1CQ96JP0 617 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 AGAP3Q96P47 875 aa7.12□□□□□ -1.27
VPS11-201ENST00000524454 ACOX2Q99424 681 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms