RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 STK10O94804 968 aaKnown RBP12.56□□□□□ -0.4
CCNC-216ENST00000523961 HEXIM1O94992 359 aaKnown RBP12.56□□□□□ -0.4
CCNC-216ENST00000523961 TRBC1P01850 177 aa12.56□□□□□ -0.4
CCNC-216ENST00000523961 CTPS1P17812 591 aa12.56□□□□□ -0.4
CCNC-216ENST00000523961 NFKB1P19838 968 aa12.56□□□□□ -0.4
CCNC-216ENST00000523961 CD68P34810 354 aaPredicted RBP12.56□□□□□ -0.4
CCNC-216ENST00000523961 IGFALSP35858 605 aa12.56□□□□□ -0.4
CCNC-216ENST00000523961 RXRGP48443 463 aa12.56□□□□□ -0.4
CCNC-216ENST00000523961 ARRB1P49407 418 aaPredicted RBP12.56□□□□□ -0.4
CCNC-216ENST00000523961 PFN3P60673 137 aa12.56□□□□□ -0.4
CCNC-216ENST00000523961 SUZ12Q15022 739 aaKnown RBP12.56□□□□□ -0.4
CCNC-216ENST00000523961 ACOX1Q15067 660 aa12.56□□□□□ -0.4
CCNC-216ENST00000523961 CNGA3Q16281 694 aa12.56□□□□□ -0.4
CCNC-216ENST00000523961 WSCD2Q2TBF2 565 aa12.56□□□□□ -0.4
CCNC-216ENST00000523961 ITPRIPL1Q6GPH6 555 aa12.56□□□□□ -0.4
CCNC-216ENST00000523961 ZNF567Q8N184 647 aa12.56□□□□□ -0.4
CCNC-216ENST00000523961 TP53I13Q8NBR0 393 aaPredicted RBP12.56□□□□□ -0.4
CCNC-216ENST00000523961 LPCAT1Q8NF37 534 aa12.56□□□□□ -0.4
CCNC-216ENST00000523961 TADA1Q96BN2 335 aa12.56□□□□□ -0.4
CCNC-216ENST00000523961 FCRL5Q96RD9 977 aa12.56□□□□□ -0.4
CCNC-216ENST00000523961 FAM118BQ9BPY3 351 aa12.56□□□□□ -0.4
CCNC-216ENST00000523961 C10orf88Q9H8K7 445 aa12.56□□□□□ -0.4
CCNC-216ENST00000523961 FAM153AQ9UHL3 310 aa12.56□□□□□ -0.4
CCNC-216ENST00000523961 ASCC3Q8N3C0 2202 aaKnown RBP12.56□□□□□ -0.4
CCNC-216ENST00000523961 SPTBN4Q9H254 2564 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 DCDC2BA2VCK2 349 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 CAPN8A6NHC0 703 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 ANKRD66B4E2M5 251 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 KCNN4O15554 427 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 PCDHGA12O60330 932 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 ALPIP09923 528 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 CD59P13987 128 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 ZNF30P17039 623 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 CSRP1P21291 193 aaKnown RBP12.55□□□□□ -0.4
CCNC-216ENST00000523961 LHCGRP22888 699 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 HNF1BP35680 557 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 YPEL5P62699 121 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 CDK18Q07002 472 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 IRF4Q15306 451 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 PRAMEF14Q5SWL7 426 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 FAM182AQ5T1J6 154 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 CCDC70Q6NSX1 233 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 DGLUCYQ7Z3D6 616 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 SLC13A5Q86YT5 568 aaPredicted RBP12.55□□□□□ -0.4
CCNC-216ENST00000523961 REXO1L1PQ8IX06 675 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 CBARPQ8N350 705 aaPredicted RBP12.55□□□□□ -0.4
CCNC-216ENST00000523961 SPATA22Q8NHS9 363 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 IFT43Q96FT9 208 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 COQ10AQ96MF6 247 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 LYSMD1Q96S90 227 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 MLPHQ9BV36 600 aaPredicted RBP12.55□□□□□ -0.4
CCNC-216ENST00000523961 TLR10Q9BXR5 811 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 FRMD8P1Q9BZ68 369 aaPredicted RBP12.55□□□□□ -0.4
CCNC-216ENST00000523961 SLC32A1Q9H598 525 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 MBNL1Q9NR56 388 aaKnown RBP12.55□□□□□ -0.4
CCNC-216ENST00000523961 GPR27Q9NS67 375 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 RSPH14Q9UHP6 348 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 CABIN1Q9Y6J0 2220 aa12.55□□□□□ -0.4
CCNC-216ENST00000523961 SPTY2D1-AS1A0A0U1RR47 76 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 TCRBV7S2A1N4TA0A589 114 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 FLRT2O43155 660 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 PMPCBO75439 489 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 NDST3O95803 873 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 MT-CYBP00156 380 aaPredicted RBP12.54□□□□□ -0.4
CCNC-216ENST00000523961 MSNP26038 577 aaKnown RBP12.54□□□□□ -0.4
CCNC-216ENST00000523961 TNNT3P45378 269 aaPredicted RBP12.54□□□□□ -0.4
CCNC-216ENST00000523961 THOP1P52888 689 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 CCDC173Q0VFZ6 552 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 MTM1Q13496 603 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 PTK2BQ14289 1009 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 PCSK7Q16549 785 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 QPCTQ16769 361 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 ANKRD20A2Q5SQ80 823 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 ANKRD20A1Q5TYW2 823 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 ANKRD20A3Q5VUR7 823 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 LRRC66Q68CR7 880 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 DENND2CQ68D51 928 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 CRTC1Q6UUV9 634 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 DBX2Q6ZNG2 339 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 PIP4P1Q86T03 277 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 TSPAN33Q86UF1 283 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 SLC22A18ASQ8N1D0 253 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 SLC35B2Q8TB61 432 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 NUS1Q96E22 293 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 SPATA13Q96N96 652 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 TRIB3Q96RU7 358 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 GBA3Q9H227 469 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 USP29Q9HBJ7 922 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 TRMT1Q9NXH9 659 aaKnown RBP12.54□□□□□ -0.4
CCNC-216ENST00000523961 UBP1Q9NZI7 540 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 R3HDM2Q9Y2K5 976 aaKnown RBP12.54□□□□□ -0.4
CCNC-216ENST00000523961 JRKLQ9Y4A0 524 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 DMXL1Q9Y485 3027 aa12.54□□□□□ -0.4
CCNC-216ENST00000523961 LAMA1P25391 3075 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 SH3BP5O60239 455 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 KIF5CO60282 957 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 ANXA9O76027 345 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 EPOP01588 193 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 PCCBP05166 539 aa12.53□□□□□ -0.4
CCNC-216ENST00000523961 ITGAVP06756 1048 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms