RNA–Protein interactions for RNA: ENST00000523091.5

CHMP7-210, Transcript of charged multivesicular body protein 7, humanhuman

TSL 1 (best)

Gene CHMP7, Length 2,672 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-210ENST00000523091 CALML6Q8TD86 181 aa14.85□□□□□ -0.03
CHMP7-210ENST00000523091 SMIM14Q96QK8 99 aa14.85□□□□□ -0.03
CHMP7-210ENST00000523091 ZNF184Q99676 751 aaPredicted RBP14.85□□□□□ -0.03
CHMP7-210ENST00000523091 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.85□□□□□ -0.03
CHMP7-210ENST00000523091 ALG9Q9H6U8 611 aa14.85□□□□□ -0.03
CHMP7-210ENST00000523091 OLA1Q9NTK5 396 aaKnown RBP14.85□□□□□ -0.03
CHMP7-210ENST00000523091 RGSL1A5PLK6 1076 aa14.85□□□□□ -0.03
CHMP7-210ENST00000523091 TRPA1O75762 1119 aa14.85□□□□□ -0.03
CHMP7-210ENST00000523091 LTA4HP09960 611 aaKnown RBP14.85□□□□□ -0.03
CHMP7-210ENST00000523091 SELPP16109 830 aa14.85□□□□□ -0.03
CHMP7-210ENST00000523091 TPP2P29144 1249 aaPredicted RBP14.85□□□□□ -0.03
CHMP7-210ENST00000523091 PRDX6P30041 224 aa14.85□□□□□ -0.03
CHMP7-210ENST00000523091 CLCN5P51795 746 aa14.85□□□□□ -0.03
CHMP7-210ENST00000523091 SEMA3AQ14563 771 aa14.85□□□□□ -0.03
CHMP7-210ENST00000523091 SLC43A3Q8NBI5 491 aa14.85□□□□□ -0.03
CHMP7-210ENST00000523091 RCN3Q96D15 328 aa14.85□□□□□ -0.03
CHMP7-210ENST00000523091 EXOC2Q96KP1 924 aa14.85□□□□□ -0.03
CHMP7-210ENST00000523091 NR1H4Q96RI1 486 aaPredicted RBP14.85□□□□□ -0.03
CHMP7-210ENST00000523091 CCDC28BQ9BUN5 200 aa14.85□□□□□ -0.03
CHMP7-210ENST00000523091 ZNF385DQ9H6B1 395 aa14.85□□□□□ -0.03
CHMP7-210ENST00000523091 SLC38A8A6NNN8 435 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 ARVCFO00192 962 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 TBC1D4O60343 1298 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 PRAMEF11O60813 436 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 GJB5O95377 273 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 GOT2P00505 430 aaKnown RBP14.84□□□□□ -0.03
CHMP7-210ENST00000523091 MYCP01106 439 aaPredicted RBP14.84□□□□□ -0.03
CHMP7-210ENST00000523091 INHAP05111 366 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 LYNP07948 512 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 UBTFL6P0CB48 400 aaPredicted RBP14.84□□□□□ -0.03
CHMP7-210ENST00000523091 THRAP10827 490 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 DNAJB1P25685 340 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 PPARGP37231 505 aaPredicted RBP14.84□□□□□ -0.03
CHMP7-210ENST00000523091 RPS24P62847 133 aaKnown RBP14.84□□□□□ -0.03
CHMP7-210ENST00000523091 PFKPQ01813 784 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 SULT2A1Q06520 285 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 ZNF235Q14590 738 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 PARP15Q460N3 678 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 ACBD5Q5T8D3 534 aaPredicted RBP14.84□□□□□ -0.03
CHMP7-210ENST00000523091 AGAP9Q5VTM2 703 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 IL31Q6EBC2 164 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 SPPL2BQ8TCT7 592 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 FATE1Q969F0 183 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 CNDP1Q96KN2 507 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 UBXN10Q96LJ8 280 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 POLR1EQ9GZS1 481 aaKnown RBP14.84□□□□□ -0.03
CHMP7-210ENST00000523091 MFSD1Q9H3U5 465 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.84□□□□□ -0.03
CHMP7-210ENST00000523091 VTI1BQ9UEU0 232 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 LRFN2Q9ULH4 789 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 COPG1Q9Y678 874 aaKnown RBP14.84□□□□□ -0.03
CHMP7-210ENST00000523091 SDHDO14521 159 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 SLC7A4O43246 635 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 NPHS1O60500 1241 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 PAPSS2O95340 614 aaPredicted RBP14.84□□□□□ -0.03
CHMP7-210ENST00000523091 GALTP07902 379 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 MTTPP55157 894 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 ZNF549Q6P9A3 640 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 IZUMO2Q6UXV1 221 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 PIWIL4Q7Z3Z4 852 aaKnown RBP14.84□□□□□ -0.03
CHMP7-210ENST00000523091 DSELQ8IZU8 1212 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 RNF148Q8N7C7 305 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 SNX31Q8N9S9 440 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 MIPOL1Q8TD10 442 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 SPON2Q9BUD6 331 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.84□□□□□ -0.03
CHMP7-210ENST00000523091 COMMD3-BMI1R4GMX3 469 aa14.84□□□□□ -0.03
CHMP7-210ENST00000523091 CCDC162PA2VCL2 907 aa14.83□□□□□ -0.03
CHMP7-210ENST00000523091 TBKBP1A7MCY6 615 aa14.83□□□□□ -0.03
CHMP7-210ENST00000523091 F5H5T6 163 aa14.83□□□□□ -0.03
CHMP7-210ENST00000523091 STX16-NPEPL1H3BU86 382 aa14.83□□□□□ -0.03
CHMP7-210ENST00000523091 CFLARO15519 480 aa14.83□□□□□ -0.03
CHMP7-210ENST00000523091 IPO13O94829 963 aaKnown RBP14.83□□□□□ -0.03
CHMP7-210ENST00000523091 RGRP47804 291 aa14.83□□□□□ -0.03
CHMP7-210ENST00000523091 C1QTNF8P60827 252 aa14.83□□□□□ -0.03
CHMP7-210ENST00000523091 LSAMPQ13449 338 aa14.83□□□□□ -0.03
CHMP7-210ENST00000523091 CYLC2Q14093 348 aaPredicted RBP14.83□□□□□ -0.03
CHMP7-210ENST00000523091 RYBPQ8N488 228 aaPredicted RBP14.83□□□□□ -0.03
CHMP7-210ENST00000523091 PDCD6IPQ8WUM4 868 aaKnown RBP14.83□□□□□ -0.03
CHMP7-210ENST00000523091 EXT2Q93063 718 aa14.83□□□□□ -0.03
CHMP7-210ENST00000523091 SPATA17Q96L03 361 aa14.83□□□□□ -0.03
CHMP7-210ENST00000523091 DDX50Q9BQ39 737 aaKnown RBP14.83□□□□□ -0.03
CHMP7-210ENST00000523091 PDFQ9HBH1 243 aa14.83□□□□□ -0.03
CHMP7-210ENST00000523091 ADAMTS6Q9UKP5 1117 aa14.83□□□□□ -0.03
CHMP7-210ENST00000523091 ZFP37Q9Y6Q3 630 aaPredicted RBP14.83□□□□□ -0.03
CHMP7-210ENST00000523091 SLCO1B7G3V0H7 640 aa14.83□□□□□ -0.04
CHMP7-210ENST00000523091 FKBP6O75344 327 aa14.83□□□□□ -0.04
CHMP7-210ENST00000523091 MT-CO1P00395 513 aa14.83□□□□□ -0.04
CHMP7-210ENST00000523091 ZDHHC11BP0C7U3 371 aa14.83□□□□□ -0.04
CHMP7-210ENST00000523091 SGSHP51688 502 aa14.83□□□□□ -0.04
CHMP7-210ENST00000523091 PKNOX1P55347 436 aa14.83□□□□□ -0.04
CHMP7-210ENST00000523091 DNAJB13P59910 316 aa14.83□□□□□ -0.04
CHMP7-210ENST00000523091 PPP1R3AQ16821 1122 aa14.83□□□□□ -0.04
CHMP7-210ENST00000523091 LIN52Q52LA3 116 aa14.83□□□□□ -0.04
CHMP7-210ENST00000523091 LPCAT4Q643R3 524 aa14.83□□□□□ -0.04
CHMP7-210ENST00000523091 CPSF7Q8N684 471 aaKnown RBP14.83□□□□□ -0.04
CHMP7-210ENST00000523091 USP13Q92995 863 aaPredicted RBP14.83□□□□□ -0.04
CHMP7-210ENST00000523091 CDRT15Q96T59 188 aa14.83□□□□□ -0.04
CHMP7-210ENST00000523091 UBFD1O14562 309 aaKnown RBP14.82□□□□□ -0.04
CHMP7-210ENST00000523091 SCAMP3O14828 347 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms