RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 TUBB4BP68371 445 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 CNTN1Q12860 1018 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 CALCOCO2Q13137 446 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 MORF4L2Q15014 288 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 PTPRRQ15256 657 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 QPCTQ16769 361 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 AASDHQ4L235 1098 aaPredicted RBP11.98□□□□□ -0.49
PVT1-215ENST00000522963 SIRPB2Q5JXA9 342 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 CFAP58Q5T655 872 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 NAPEPLDQ6IQ20 393 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 BRAT1Q6PJG6 821 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 PPP1R21Q6ZMI0 780 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 ZNF534Q76KX8 674 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 AADATQ8N5Z0 425 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 PAF1Q8N7H5 531 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 BBOF1Q8ND07 529 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 MCUQ8NE86 351 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 OR52K1Q8NGK4 314 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 SPOCK2Q92563 424 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 FOXJ1Q92949 421 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 ART4Q93070 314 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 PPP1R16AQ96I34 528 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 ADGRE3Q9BY15 652 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 HDAC8Q9BY41 377 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 SGK2Q9HBY8 427 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 ARNT2Q9HBZ2 717 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 CASS4Q9NQ75 786 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 DYRK4Q9NR20 520 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 FAM114A2Q9NRY5 505 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 TMEM74BQ9NUR3 256 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 PIH1D1Q9NWS0 290 aaKnown RBP11.98□□□□□ -0.49
PVT1-215ENST00000522963 PHTF1Q9UMS5 762 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 RPL26L1Q9UNX3 145 aaKnown RBP11.98□□□□□ -0.49
PVT1-215ENST00000522963 SHOC2Q9UQ13 582 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 PCDHGA5Q9Y5G8 931 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 DOCK9Q9BZ29 2069 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 ADAMTS9Q9P2N4 1935 aa11.98□□□□□ -0.49
PVT1-215ENST00000522963 TBC1D3DA0A087WVF3 549 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 TBC1D3IA0A087WXS9 549 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 TBC1D3EA0A087X179 549 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 TBC1D3KA0A087X1G2 549 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 A0A1W2PQ67 120 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 TBC1D3FA6NER0 549 aaPredicted RBP11.97□□□□□ -0.49
PVT1-215ENST00000522963 UPK3BL1B0FP48 263 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 ANKRD66B4E2M5 251 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 TBC1D3LB9A6J9 549 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 UPK3BL2E5RIL1 263 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 KHNYNO15037 678 aaKnown RBP11.97□□□□□ -0.49
PVT1-215ENST00000522963 IGLV3-19P01714 112 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 FGF1P05230 155 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 TBC1D3HP0C7X1 549 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 CTPS1P17812 591 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 ABL2P42684 1182 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 TNNT3P45378 269 aaPredicted RBP11.97□□□□□ -0.49
PVT1-215ENST00000522963 GRIA4P48058 902 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 CARSP49589 748 aaKnown RBP11.97□□□□□ -0.49
PVT1-215ENST00000522963 EPHB1P54762 984 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 PLTPP55058 493 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 MTM1Q13496 603 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 NAA30Q147X3 362 aaPredicted RBP11.97□□□□□ -0.49
PVT1-215ENST00000522963 CSRP2Q16527 193 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 UGP2Q16851 508 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 ERCC6LQ2NKX8 1250 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 TRIM61Q5EBN2 209 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 LRRC73Q5JTD7 316 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 SPDYCQ5MJ68 293 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 WDR45BQ5MNZ6 344 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 PIP5KL1Q5T9C9 394 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 TBC1D3GQ6DHY5 549 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 TBC1D3CQ6IPX1 549 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 LRRC8BQ6P9F7 803 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 PRR23CQ6ZRP0 262 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 USP30Q70CQ3 517 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 ERN2Q76MJ5 926 aaKnown RBP11.97□□□□□ -0.49
PVT1-215ENST00000522963 LINC00523Q86TU6 105 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 TTC7BQ86TV6 843 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 CAND1Q86VP6 1230 aaKnown RBP11.97□□□□□ -0.49
PVT1-215ENST00000522963 SYT12Q8IV01 421 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 TBC1D3Q8IZP1 549 aaPredicted RBP11.97□□□□□ -0.49
PVT1-215ENST00000522963 GPR161Q8N6U8 529 aaKnown RBP11.97□□□□□ -0.49
PVT1-215ENST00000522963 IFT81Q8WYA0 676 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 UBXN4Q92575 508 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 RMDN1Q96DB5 314 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 PWWP2AQ96N64 755 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 SERPINB12Q96P63 405 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 ZDHHC18Q9NUE0 388 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 EIF2B4Q9UI10 523 aaKnown RBP11.97□□□□□ -0.49
PVT1-215ENST00000522963 PPIL1Q9Y3C6 166 aa11.97□□□□□ -0.49
PVT1-215ENST00000522963 KNL1Q8NG31 2342 aa11.96□□□□□ -0.49
PVT1-215ENST00000522963 A0A0J9YYE9 177 aa11.96□□□□□ -0.49
PVT1-215ENST00000522963 LRRC72A6NJI9 287 aa11.96□□□□□ -0.49
PVT1-215ENST00000522963 METTL12A8MUP2 240 aa11.96□□□□□ -0.49
PVT1-215ENST00000522963 SMAPO00193 183 aa11.96□□□□□ -0.49
PVT1-215ENST00000522963 NDC80O14777 642 aa11.96□□□□□ -0.49
PVT1-215ENST00000522963 SPINT1O43278 529 aa11.96□□□□□ -0.49
PVT1-215ENST00000522963 LRP3O75074 770 aa11.96□□□□□ -0.49
PVT1-215ENST00000522963 AVILO75366 819 aa11.96□□□□□ -0.49
PVT1-215ENST00000522963 TRBC1P01850 177 aa11.96□□□□□ -0.49
PVT1-215ENST00000522963 ALPIP09923 528 aa11.96□□□□□ -0.49
PVT1-215ENST00000522963 ZNF806P0C7X5 589 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms