RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 PDSS2Q86YH6 399 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 PHC3Q8NDX5 983 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 GABPB2Q8TAK5 448 aaPredicted RBP10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 BCL7CQ8WUZ0 217 aaPredicted RBP10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 EXT2Q93063 718 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 SPATA17Q96L03 361 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 DDX50Q9BQ39 737 aaKnown RBP10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 STARD7Q9NQZ5 370 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 CHD5Q8TDI0 1954 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 CCDC189A1A4V9 331 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 ADAM12O43184 909 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 AOC2O75106 756 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 MT-CO1P00395 513 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 ALDH2P05091 517 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 RGRP47804 291 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 ATXN3P54252 364 aaPredicted RBP10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 AQP4P55087 323 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 MS4A2Q01362 244 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 TRIP10Q15642 601 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 CLEC6AQ6EIG7 209 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 OR52E8Q6IFG1 317 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 PGAM4Q8N0Y7 254 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 SLC43A3Q8NBI5 491 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 CCDC126Q96EE4 140 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 TMA16Q96EY4 203 aaKnown RBP10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 FEM1CQ96JP0 617 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 PPP1R12CQ9BZL4 782 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 MEAF6Q9HAF1 191 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 POLR3BQ9NW08 1133 aaPredicted RBP10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 SRRDQ9UH36 339 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 PCDHB7Q9Y5E2 793 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 SLC38A8A6NNN8 435 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 F5H5T6 163 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 CD3EAPO15446 510 aaKnown RBP10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 GLP2RO95838 553 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 FGF1P05230 155 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 HDCP19113 662 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 HLA-DPA1P20036 260 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 FDXRP22570 491 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 SATB1Q01826 763 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 ART3Q13508 389 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 FAM45BPQ6NSW5 357 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 CYHR1Q6ZMK1 362 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 CHSY3Q70JA7 882 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 RYBPQ8N488 228 aaPredicted RBP10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 FAM45AQ8TCE6 357 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 EXOC2Q96KP1 924 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 SMIM14Q96QK8 99 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 SERPINI1Q99574 410 aa10.78□□□□□ -0.68
RAB11FIP1-204ENST00000522774 MAGEA13PA6NCF6 341 aa10.77□□□□□ -0.68
RAB11FIP1-204ENST00000522774 LRRC14BA6NHZ5 514 aa10.77□□□□□ -0.68
RAB11FIP1-204ENST00000522774 TRPA1O75762 1119 aa10.77□□□□□ -0.68
RAB11FIP1-204ENST00000522774 GJB5O95377 273 aa10.77□□□□□ -0.68
RAB11FIP1-204ENST00000522774 CD1DP15813 335 aa10.77□□□□□ -0.68
RAB11FIP1-204ENST00000522774 IMPDH1P20839 514 aa10.77□□□□□ -0.68
RAB11FIP1-204ENST00000522774 RPS24P62847 133 aaKnown RBP10.77□□□□□ -0.68
RAB11FIP1-204ENST00000522774 MRPS22P82650 360 aaKnown RBP10.77□□□□□ -0.68
RAB11FIP1-204ENST00000522774 UNC50Q53HI1 259 aa10.77□□□□□ -0.68
RAB11FIP1-204ENST00000522774 ZNF678Q5SXM1 525 aa10.77□□□□□ -0.68
RAB11FIP1-204ENST00000522774 LHX8Q68G74 356 aa10.77□□□□□ -0.68
RAB11FIP1-204ENST00000522774 SDCCAG8Q86SQ7 713 aaPredicted RBP10.77□□□□□ -0.68
RAB11FIP1-204ENST00000522774 CD99L2Q8TCZ2 262 aa10.77□□□□□ -0.68
RAB11FIP1-204ENST00000522774 KLHL4Q9C0H6 718 aa10.77□□□□□ -0.68
RAB11FIP1-204ENST00000522774 EFCAB1Q9HAE3 211 aa10.77□□□□□ -0.68
RAB11FIP1-204ENST00000522774 EML4Q9HC35 981 aaKnown RBP10.77□□□□□ -0.68
RAB11FIP1-204ENST00000522774 SCOCQ9UIL1 159 aa10.77□□□□□ -0.68
RAB11FIP1-204ENST00000522774 ZFP37Q9Y6Q3 630 aaPredicted RBP10.77□□□□□ -0.68
RAB11FIP1-204ENST00000522774 PPP6CO00743 305 aa10.77□□□□□ -0.69
RAB11FIP1-204ENST00000522774 RNASEH1O60930 286 aaKnown RBP10.77□□□□□ -0.69
RAB11FIP1-204ENST00000522774 RPP40O75818 363 aaKnown RBP10.77□□□□□ -0.69
RAB11FIP1-204ENST00000522774 SUPT7LO94864 414 aa10.77□□□□□ -0.69
RAB11FIP1-204ENST00000522774 ALDH1A1P00352 501 aa10.77□□□□□ -0.69
RAB11FIP1-204ENST00000522774 LYNP07948 512 aa10.77□□□□□ -0.69
RAB11FIP1-204ENST00000522774 ZCCHC18P0CG32 403 aa10.77□□□□□ -0.69
RAB11FIP1-204ENST00000522774 SELPP16109 830 aa10.77□□□□□ -0.69
RAB11FIP1-204ENST00000522774 RPL17P18621 184 aaKnown RBP10.77□□□□□ -0.69
RAB11FIP1-204ENST00000522774 CDH13P55290 713 aa10.77□□□□□ -0.69
RAB11FIP1-204ENST00000522774 FLOT2Q14254 428 aa10.77□□□□□ -0.69
RAB11FIP1-204ENST00000522774 GSTA3Q16772 222 aa10.77□□□□□ -0.69
RAB11FIP1-204ENST00000522774 IL31Q6EBC2 164 aa10.77□□□□□ -0.69
RAB11FIP1-204ENST00000522774 SLC22A9Q8IVM8 553 aa10.77□□□□□ -0.69
RAB11FIP1-204ENST00000522774 FAM156AQ8NDB6 213 aa10.77□□□□□ -0.69
RAB11FIP1-204ENST00000522774 TRIB3Q96RU7 358 aa10.77□□□□□ -0.69
RAB11FIP1-204ENST00000522774 SPON2Q9BUD6 331 aa10.77□□□□□ -0.69
RAB11FIP1-204ENST00000522774 YIPF3Q9GZM5 350 aa10.77□□□□□ -0.69
RAB11FIP1-204ENST00000522774 TRPC7Q9HCX4 862 aa10.77□□□□□ -0.69
RAB11FIP1-204ENST00000522774 ZDHHC7Q9NXF8 308 aa10.77□□□□□ -0.69
RAB11FIP1-204ENST00000522774 VPS28Q9UK41 221 aa10.77□□□□□ -0.69
RAB11FIP1-204ENST00000522774 SPO11Q9Y5K1 396 aa10.77□□□□□ -0.69
RAB11FIP1-204ENST00000522774 ATP6AP2A0A1C7CYW4 349 aa10.76□□□□□ -0.69
RAB11FIP1-204ENST00000522774 H3BMM5 538 aa10.76□□□□□ -0.69
RAB11FIP1-204ENST00000522774 CASQ2O14958 399 aaPredicted RBP10.76□□□□□ -0.69
RAB11FIP1-204ENST00000522774 ACSL4O60488 711 aa10.76□□□□□ -0.69
RAB11FIP1-204ENST00000522774 ATP6AP2O75787 350 aa10.76□□□□□ -0.69
RAB11FIP1-204ENST00000522774 SNUPNO95149 360 aaKnown RBP10.76□□□□□ -0.69
RAB11FIP1-204ENST00000522774 SIX3O95343 332 aaPredicted RBP10.76□□□□□ -0.69
RAB11FIP1-204ENST00000522774 GALTP07902 379 aa10.76□□□□□ -0.69
RAB11FIP1-204ENST00000522774 SERPINF2P08697 491 aa10.76□□□□□ -0.69
RAB11FIP1-204ENST00000522774 HSPA1AP0DMV8 641 aaKnown RBP10.76□□□□□ -0.69
RAB11FIP1-204ENST00000522774 HSPA1BP0DMV9 641 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms