RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 DPYSL3Q14195 570 aa20.76■□□□□ 0.91
SDCBP-209ENST00000522243 CNGA3Q16281 694 aa20.76■□□□□ 0.91
SDCBP-209ENST00000522243 ISXQ2M1V0 245 aa20.76■□□□□ 0.91
SDCBP-209ENST00000522243 ATL2Q8NHH9 583 aa20.76■□□□□ 0.91
SDCBP-209ENST00000522243 FAM71BQ8TC56 605 aa20.76■□□□□ 0.91
SDCBP-209ENST00000522243 OR1E3Q8WZA6 343 aa20.76■□□□□ 0.91
SDCBP-209ENST00000522243 CCDC3Q9BQI4 270 aa20.76■□□□□ 0.91
SDCBP-209ENST00000522243 LGR4Q9BXB1 951 aa20.76■□□□□ 0.91
SDCBP-209ENST00000522243 MOSPD1Q9UJG1 213 aa20.76■□□□□ 0.91
SDCBP-209ENST00000522243 CHD6Q8TD26 2715 aa20.76■□□□□ 0.91
SDCBP-209ENST00000522243 FAM208BQ5VWN6 2430 aa20.75■□□□□ 0.91
SDCBP-209ENST00000522243 TPM3P06753 285 aa20.75■□□□□ 0.91
SDCBP-209ENST00000522243 ITKQ08881 620 aa20.75■□□□□ 0.91
SDCBP-209ENST00000522243 TBC1D25Q3MII6 688 aa20.75■□□□□ 0.91
SDCBP-209ENST00000522243 NCBP2-AS2Q69YL0 99 aa20.75■□□□□ 0.91
SDCBP-209ENST00000522243 PNCKQ6P2M8 343 aa20.75■□□□□ 0.91
SDCBP-209ENST00000522243 GKN2Q86XP6 184 aa20.75■□□□□ 0.91
SDCBP-209ENST00000522243 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.75■□□□□ 0.91
SDCBP-209ENST00000522243 KYQ8NBH2 561 aa20.75■□□□□ 0.91
SDCBP-209ENST00000522243 KCTD6Q8NC69 237 aa20.75■□□□□ 0.91
SDCBP-209ENST00000522243 SNIP1Q8TAD8 396 aaKnown RBP20.75■□□□□ 0.91
SDCBP-209ENST00000522243 LRRN4Q8WUT4 740 aa20.75■□□□□ 0.91
SDCBP-209ENST00000522243 SCG3Q8WXD2 468 aaKnown RBP20.75■□□□□ 0.91
SDCBP-209ENST00000522243 NAT6Q93015 286 aa20.75■□□□□ 0.91
SDCBP-209ENST00000522243 FGF22Q9HCT0 170 aa20.75■□□□□ 0.91
SDCBP-209ENST00000522243 RCOR3Q9P2K3 495 aaPredicted RBP20.75■□□□□ 0.91
SDCBP-209ENST00000522243 PHTF1Q9UMS5 762 aa20.75■□□□□ 0.91
SDCBP-209ENST00000522243 GPR34Q9UPC5 381 aa20.75■□□□□ 0.91
SDCBP-209ENST00000522243 A0A0U1RQS6 177 aa20.74■□□□□ 0.91
SDCBP-209ENST00000522243 A0A1W2PQ67 120 aa20.74■□□□□ 0.91
SDCBP-209ENST00000522243 RRP8O43159 456 aaKnown RBP20.74■□□□□ 0.91
SDCBP-209ENST00000522243 PROSCO94903 275 aa20.74■□□□□ 0.91
SDCBP-209ENST00000522243 HEXIM1O94992 359 aaKnown RBP20.74■□□□□ 0.91
SDCBP-209ENST00000522243 H2AFZP0C0S5 128 aa20.74■□□□□ 0.91
SDCBP-209ENST00000522243 CTPS1P17812 591 aa20.74■□□□□ 0.91
SDCBP-209ENST00000522243 HNRNPH3P31942 346 aaKnown RBP20.74■□□□□ 0.91
SDCBP-209ENST00000522243 VIPR1P32241 457 aa20.74■□□□□ 0.91
SDCBP-209ENST00000522243 KIAA1024LP59773 190 aa20.74■□□□□ 0.91
SDCBP-209ENST00000522243 CCDC173Q0VFZ6 552 aa20.74■□□□□ 0.91
SDCBP-209ENST00000522243 C3orf38Q5JPI3 329 aa20.74■□□□□ 0.91
SDCBP-209ENST00000522243 LVRNQ6Q4G3 990 aa20.74■□□□□ 0.91
SDCBP-209ENST00000522243 H2AFVQ71UI9 128 aa20.74■□□□□ 0.91
SDCBP-209ENST00000522243 HSD11B1LQ7Z5J1 315 aa20.74■□□□□ 0.91
SDCBP-209ENST00000522243 ARL10Q8N8L6 244 aa20.74■□□□□ 0.91
SDCBP-209ENST00000522243 OR56A4Q8NGH8 313 aa20.74■□□□□ 0.91
SDCBP-209ENST00000522243 TPCN2Q8NHX9 752 aa20.74■□□□□ 0.91
SDCBP-209ENST00000522243 CTNNBL1Q8WYA6 563 aaPredicted RBP20.74■□□□□ 0.91
SDCBP-209ENST00000522243 NUS1Q96E22 293 aa20.74■□□□□ 0.91
SDCBP-209ENST00000522243 ATXN7L3BQ96GX2 97 aa20.74■□□□□ 0.91
SDCBP-209ENST00000522243 NAF1Q96HR8 494 aaKnown RBP20.74■□□□□ 0.91
SDCBP-209ENST00000522243 COQ10AQ96MF6 247 aa20.74■□□□□ 0.91
SDCBP-209ENST00000522243 SEMA3CQ99985 751 aa20.74■□□□□ 0.91
SDCBP-209ENST00000522243 ENTPD2Q9Y5L3 495 aa20.74■□□□□ 0.91
SDCBP-209ENST00000522243 PGLSO95336 258 aa20.73■□□□□ 0.91
SDCBP-209ENST00000522243 CYP2A6P11509 494 aaPredicted RBP20.73■□□□□ 0.91
SDCBP-209ENST00000522243 LHCGRP22888 699 aa20.73■□□□□ 0.91
SDCBP-209ENST00000522243 TRIM23P36406 574 aa20.73■□□□□ 0.91
SDCBP-209ENST00000522243 GARSP41250 739 aaKnown RBP20.73■□□□□ 0.91
SDCBP-209ENST00000522243 PAFAH1B3Q15102 231 aaKnown RBP20.73■□□□□ 0.91
SDCBP-209ENST00000522243 SLC18A3Q16572 532 aa20.73■□□□□ 0.91
SDCBP-209ENST00000522243 ANKRD20A8PQ5CZ79 823 aa20.73■□□□□ 0.91
SDCBP-209ENST00000522243 ZFYVE27Q5T4F4 411 aa20.73■□□□□ 0.91
SDCBP-209ENST00000522243 ARMC12Q5T9G4 340 aa20.73■□□□□ 0.91
SDCBP-209ENST00000522243 RBM44Q6ZP01 1051 aaKnown RBP20.73■□□□□ 0.91
SDCBP-209ENST00000522243 TAF8Q7Z7C8 310 aa20.73■□□□□ 0.91
SDCBP-209ENST00000522243 TSPAN33Q86UF1 283 aa20.73■□□□□ 0.91
SDCBP-209ENST00000522243 TEX26Q8N6G2 289 aa20.73■□□□□ 0.91
SDCBP-209ENST00000522243 OR8K1Q8NGG5 319 aa20.73■□□□□ 0.91
SDCBP-209ENST00000522243 SMIM14Q96QK8 99 aa20.73■□□□□ 0.91
SDCBP-209ENST00000522243 RBM15Q96T37 977 aaKnown RBP eCLIP20.73■□□□□ 0.91
SDCBP-209ENST00000522243 TMEM168Q9H0V1 697 aa20.73■□□□□ 0.91
SDCBP-209ENST00000522243 DEF6Q9H4E7 631 aa20.73■□□□□ 0.91
SDCBP-209ENST00000522243 WDR26Q9H7D7 661 aa20.73■□□□□ 0.91
SDCBP-209ENST00000522243 SUDS3Q9H7L9 328 aaPredicted RBP20.73■□□□□ 0.91
SDCBP-209ENST00000522243 POLR1BQ9H9Y6 1135 aa20.73■□□□□ 0.91
SDCBP-209ENST00000522243 CYP4F12Q9HCS2 524 aa20.73■□□□□ 0.91
SDCBP-209ENST00000522243 UVRAGQ9P2Y5 699 aa20.73■□□□□ 0.91
SDCBP-209ENST00000522243 RABGEF1Q9UJ41 708 aa20.73■□□□□ 0.91
SDCBP-209ENST00000522243 SATB2Q9UPW6 733 aa20.73■□□□□ 0.91
SDCBP-209ENST00000522243 RAI2Q9Y5P3 530 aa20.73■□□□□ 0.91
SDCBP-209ENST00000522243 DGKBQ9Y6T7 804 aa20.73■□□□□ 0.91
SDCBP-209ENST00000522243 GOLGA6CA6NDK9 693 aa20.72■□□□□ 0.91
SDCBP-209ENST00000522243 GOLGA6BA6NDN3 693 aa20.72■□□□□ 0.91
SDCBP-209ENST00000522243 NPIPB15A6NHN6 443 aaPredicted RBP20.72■□□□□ 0.91
SDCBP-209ENST00000522243 PDHA1P08559 390 aa20.72■□□□□ 0.91
SDCBP-209ENST00000522243 GOLGA6DP0CG33 693 aa20.72■□□□□ 0.91
SDCBP-209ENST00000522243 KELP23276 732 aa20.72■□□□□ 0.91
SDCBP-209ENST00000522243 ETV3P41162 512 aa20.72■□□□□ 0.91
SDCBP-209ENST00000522243 LSSP48449 732 aa20.72■□□□□ 0.91
SDCBP-209ENST00000522243 GALNT2Q10471 571 aa20.72■□□□□ 0.91
SDCBP-209ENST00000522243 ARHGEF7Q14155 803 aa20.72■□□□□ 0.91
SDCBP-209ENST00000522243 ASTE1Q2TB18 679 aaPredicted RBP20.72■□□□□ 0.91
SDCBP-209ENST00000522243 RALGPS1Q5JS13 557 aa20.72■□□□□ 0.91
SDCBP-209ENST00000522243 SPECC1LQ69YQ0 1117 aa20.72■□□□□ 0.91
SDCBP-209ENST00000522243 FOXR1Q6PIV2 292 aa20.72■□□□□ 0.91
SDCBP-209ENST00000522243 SFTPA2Q8IWL1 248 aa20.72■□□□□ 0.91
SDCBP-209ENST00000522243 CCL4L1Q8NHW4 92 aa20.72■□□□□ 0.91
SDCBP-209ENST00000522243 SPOCK2Q92563 424 aa20.72■□□□□ 0.91
SDCBP-209ENST00000522243 CCDC74AQ96AQ1 378 aa20.72■□□□□ 0.91
SDCBP-209ENST00000522243 GOLGA6AQ9NYA3 693 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms