RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 RSPH9Q9H1X1 276 aaPredicted RBP13.11□□□□□ -0.31
CPNE3-205ENST00000522240 ACBD3Q9H3P7 528 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 PPCSQ9HAB8 311 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 TREX1Q9NSU2 369 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 FETUBQ9UGM5 382 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 PPM1HQ9ULR3 514 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 PLAAQ9Y263 795 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 ZNF711Q9Y462 761 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 RPS6KL1Q9Y6S9 549 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 ZCWPW2A0A1B0GU75 182 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 TCRBV9S1A1TA0A576 114 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 FAM86C2PA6NEL3 165 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 ANTXRLA6NF34 631 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 LDB2O43679 373 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 SYNCRIPO60506 623 aaKnown RBP13.1□□□□□ -0.31
CPNE3-205ENST00000522240 RNF40O75150 1001 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 ALDH1A2O94788 518 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 KLF8O95600 359 aaPredicted RBP13.1□□□□□ -0.31
CPNE3-205ENST00000522240 ADH1BP00325 375 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 IVLP07476 585 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 HOXB2P14652 356 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 PSMA3P25788 255 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 SSTR1P30872 391 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 SUOXP51687 545 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 ZNF140P52738 457 aaPredicted RBP13.1□□□□□ -0.31
CPNE3-205ENST00000522240 STARD6P59095 220 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 ACVR1Q04771 509 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 NAB1Q13506 487 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 KLHL38Q2WGJ6 581 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 EOGTQ5NDL2 527 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 FAM46CQ5VWP2 391 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 MAMSTRQ6ZN01 415 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 C3orf62Q6ZUJ4 267 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 PARS2Q7L3T8 475 aaKnown RBP13.1□□□□□ -0.31
CPNE3-205ENST00000522240 ZNF687Q8N1G0 1237 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 TTC30BQ8N4P2 665 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 OR2T3Q8NH03 318 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 STYXQ8WUJ0 223 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 SCRN2Q96FV2 425 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 ZIM3Q96PE6 472 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 RUFY1Q96T51 708 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 TMEM109Q9BVC6 243 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 ACSS3Q9H6R3 686 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 CHRAC1Q9NRG0 131 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 FBXL21Q9UKT6 434 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 CA14Q9ULX7 337 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 SPO11Q9Y5K1 396 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 FAM169AQ9Y6X4 670 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 SCN8AQ9UQD0 1980 aa13.1□□□□□ -0.31
CPNE3-205ENST00000522240 ZNF106Q9H2Y7 1883 aaKnown RBP13.1□□□□□ -0.31
CPNE3-205ENST00000522240 C2orf81A6NN90 581 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 C16orf96A6NNT2 1141 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 KPNA3O00505 521 aaPredicted RBP13.09□□□□□ -0.31
CPNE3-205ENST00000522240 DCXO43602 365 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 RNASEH1O60930 286 aaKnown RBP13.09□□□□□ -0.31
CPNE3-205ENST00000522240 ADAM23O75077 832 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 TCEA3O75764 348 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 SASH3O75995 380 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 C1QAP02745 245 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 PRKCGP05129 697 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 PIRTP0C851 137 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 CYP2A6P11509 494 aaPredicted RBP13.09□□□□□ -0.31
CPNE3-205ENST00000522240 ZNF30P17039 623 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 NMBRP28336 390 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 SLC8A1P32418 973 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 WASP42768 502 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 IFFO1Q0D2I5 559 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 UGP2Q16851 508 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 C2orf27AQ580R0 203 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 ZNF776Q68DI1 518 aaPredicted RBP13.09□□□□□ -0.31
CPNE3-205ENST00000522240 CAPN12Q6ZSI9 719 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 CROCCP2Q86T23 111 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 CNPY4Q8N129 248 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 TXNDC5Q8NBS9 432 aaKnown RBP13.09□□□□□ -0.31
CPNE3-205ENST00000522240 FBF1Q8TES7 1133 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 MFSD3Q96ES6 412 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 CERS2Q96G23 380 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 CYTH2Q99418 400 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 CCDC77Q9BR77 488 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 TRIM56Q9BRZ2 755 aaKnown RBP13.09□□□□□ -0.31
CPNE3-205ENST00000522240 HDAC8Q9BY41 377 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 CD248Q9HCU0 757 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 LTB4R2Q9NPC1 389 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 ZDHHC4Q9NPG8 344 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 DYRK4Q9NR20 520 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 MOCS1Q9NZB8 636 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 MMP17Q9ULZ9 603 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 NDRG2Q9UN36 371 aaKnown RBP13.09□□□□□ -0.31
CPNE3-205ENST00000522240 NFS1Q9Y697 457 aa13.09□□□□□ -0.31
CPNE3-205ENST00000522240 KRBA1A5PL33 1030 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 NPIPB15A6NHN6 443 aaPredicted RBP13.08□□□□□ -0.32
CPNE3-205ENST00000522240 FAM159BA6NKW6 160 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 CHURC1-FNTBB4DL54 471 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 IL1BP01584 269 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 SHBGP04278 402 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 ALPIP09923 528 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 CHRNB1P11230 501 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 CTPS1P17812 591 aa13.08□□□□□ -0.32
CPNE3-205ENST00000522240 LPOP22079 712 aaPredicted RBP13.08□□□□□ -0.32
CPNE3-205ENST00000522240 XPAP23025 273 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms