RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 NFIAQ12857 509 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 TYSND1Q2T9J0 566 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 C15orf52Q6ZUT6 534 aaKnown RBP12.08□□□□□ -0.48
SPIDR-217ENST00000522117 STRADAQ7RTN6 431 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 NOXA1Q86UR1 476 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 DDIASQ8IXT1 998 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 THNSL1Q8IYQ7 743 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 FEZF2Q8TBJ5 459 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 HDAC2Q92769 488 aaKnown RBP12.08□□□□□ -0.48
SPIDR-217ENST00000522117 PROX1Q92786 737 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 MARC2Q969Z3 335 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 BCL7BQ9BQE9 202 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 MRPL47Q9HD33 250 aaKnown RBP12.08□□□□□ -0.48
SPIDR-217ENST00000522117 NECTIN3Q9NQS3 549 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 EIF3KQ9UBQ5 218 aaKnown RBP12.08□□□□□ -0.48
SPIDR-217ENST00000522117 DCDC2Q9UHG0 476 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 NHSQ6T4R5 1651 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.08□□□□□ -0.48
SPIDR-217ENST00000522117 F8VP50 259 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 GRID2O43424 1007 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 TPST1O60507 370 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 NOS1APO75052 506 aaPredicted RBP12.08□□□□□ -0.48
SPIDR-217ENST00000522117 TRIM16O95361 564 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 SLC4A1P02730 911 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 JUNP05412 331 aaKnown RBP12.08□□□□□ -0.48
SPIDR-217ENST00000522117 MMP8P22894 467 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 IL12AP29459 219 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 VBP1P61758 197 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 COLEC12Q5KU26 742 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 ARMC4Q5T2S8 1044 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 LRRC8EQ6NSJ5 796 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 METTL3Q86U44 580 aaKnown RBP12.08□□□□□ -0.48
SPIDR-217ENST00000522117 FAM178BQ8IXR5 827 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 LINC00518Q8N0U6 118 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 ZNF444Q8N0Y2 327 aaPredicted RBP12.08□□□□□ -0.48
SPIDR-217ENST00000522117 GALNT11Q8NCW6 608 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 OR4M1Q8NGD0 313 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 STRA6Q9BX79 667 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 ADNPQ9H2P0 1102 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 SCN4AP35499 1836 aa12.08□□□□□ -0.48
SPIDR-217ENST00000522117 CYP3A7-CYP3A51PA0A087WV96 503 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 SLC15A5A6NIM6 579 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 TCP10L2B9ZVM9 353 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 YES1P07947 543 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 TFE3P19532 575 aaPredicted RBP12.07□□□□□ -0.48
SPIDR-217ENST00000522117 PCMT1P22061 227 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 ATP2B4P23634 1241 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 CYP3A7P24462 503 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 IL1R2P27930 398 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 RBM48Q5RL73 367 aaKnown RBP12.07□□□□□ -0.48
SPIDR-217ENST00000522117 SHCBP1Q8NEM2 672 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 BEST2Q8NFU1 509 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 CDKL2Q92772 493 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 NXNL1Q96CM4 212 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 SLC45A3Q96JT2 553 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 HSFY1Q96LI6 401 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 CYP26B1Q9NR63 512 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 ZNF358Q9NW07 568 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 TNFRSF10DQ9UBN6 386 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 AURKCQ9UQB9 309 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 LY75O60449 1722 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 SBF2Q86WG5 1849 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 H0YAE9 185 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 CHADO15335 359 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 CST8O60676 142 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 RBP1P09455 135 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 IFI30P13284 250 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 IL7RP16871 459 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 FASP25445 335 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 TALDO1P37837 337 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 PPM1JQ5JR12 505 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 PRSS48Q7RTY5 328 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 MAGEE2Q8TD90 523 aaPredicted RBP12.07□□□□□ -0.48
SPIDR-217ENST00000522117 POMGNT1Q8WZA1 660 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 DACT3Q96B18 629 aaPredicted RBP12.07□□□□□ -0.48
SPIDR-217ENST00000522117 CBWD1Q9BRT8 395 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 FRMD8P1Q9BZ68 369 aaPredicted RBP12.07□□□□□ -0.48
SPIDR-217ENST00000522117 UPF3AQ9H1J1 476 aaKnown RBP12.07□□□□□ -0.48
SPIDR-217ENST00000522117 CASS4Q9NQ75 786 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 PIH1D1Q9NWS0 290 aaKnown RBP12.07□□□□□ -0.48
SPIDR-217ENST00000522117 SYBUQ9NX95 663 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 TMEM181Q9P2C4 612 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 SLC17A6Q9P2U8 582 aa12.07□□□□□ -0.48
SPIDR-217ENST00000522117 TYW5A2RUC4 315 aaKnown RBP12.06□□□□□ -0.48
SPIDR-217ENST00000522117 H0YC42 278 aa12.06□□□□□ -0.48
SPIDR-217ENST00000522117 PI15O43692 258 aa12.06□□□□□ -0.48
SPIDR-217ENST00000522117 OLFM2O95897 454 aa12.06□□□□□ -0.48
SPIDR-217ENST00000522117 TPD52P55327 224 aaPredicted RBP12.06□□□□□ -0.48
SPIDR-217ENST00000522117 MYL6P60660 151 aa12.06□□□□□ -0.48
SPIDR-217ENST00000522117 TFAMQ00059 246 aaKnown RBP12.06□□□□□ -0.48
SPIDR-217ENST00000522117 OGDHQ02218 1023 aa12.06□□□□□ -0.48
SPIDR-217ENST00000522117 PLEKHG6Q3KR16 790 aa12.06□□□□□ -0.48
SPIDR-217ENST00000522117 TBRG1Q3YBR2 411 aa12.06□□□□□ -0.48
SPIDR-217ENST00000522117 PPP1R18Q6NYC8 613 aa12.06□□□□□ -0.48
SPIDR-217ENST00000522117 CHPFQ8IZ52 775 aa12.06□□□□□ -0.48
SPIDR-217ENST00000522117 OR4M2Q8NGB6 313 aa12.06□□□□□ -0.48
SPIDR-217ENST00000522117 ERVMER34-1Q9H9K5 563 aa12.06□□□□□ -0.48
SPIDR-217ENST00000522117 CACNA2D2Q9NY47 1150 aa12.06□□□□□ -0.48
SPIDR-217ENST00000522117 CPSF3Q9UKF6 684 aaKnown RBP12.06□□□□□ -0.48
SPIDR-217ENST00000522117 PCDHGA10Q9Y5H3 936 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms