RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 ZNF806P0C7X5 589 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 PLA2G4BP0C869 781 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 CCDC192P0DO97 292 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 ZNF37AP17032 561 aaPredicted RBP6.22□□□□□ -1.41
PABPC1-216ENST00000520868 WT1P19544 449 aaPredicted RBP6.22□□□□□ -1.41
PABPC1-216ENST00000520868 TYMPP19971 482 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 TUFMP49411 452 aaKnown RBP6.22□□□□□ -1.41
PABPC1-216ENST00000520868 AARSP49588 968 aaKnown RBP eCLIP6.22□□□□□ -1.41
PABPC1-216ENST00000520868 LIG4P49917 911 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 LILRA4P59901 499 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 MYBPC2Q14324 1141 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 DHX8Q14562 1220 aaKnown RBP6.22□□□□□ -1.41
PABPC1-216ENST00000520868 ITPRIPL2Q3MIP1 535 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 SLC39A12Q504Y0 691 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 JADE1Q6IE81 842 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 CACNA2D4Q7Z3S7 1137 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 ITIH5Q86UX2 942 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 KBTBD6Q86V97 674 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 SYT2Q8N9I0 419 aaPredicted RBP6.22□□□□□ -1.41
PABPC1-216ENST00000520868 OR10T2Q8NGX3 314 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 BRIX1Q8TDN6 353 aaKnown RBP6.22□□□□□ -1.41
PABPC1-216ENST00000520868 MVB12AQ96EY5 273 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 CDK5RAP3Q96JB5 506 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 LLPHQ9BRT6 129 aaKnown RBP6.22□□□□□ -1.41
PABPC1-216ENST00000520868 ALG8Q9BVK2 526 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 TIPINQ9BVW5 301 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 GTPBP4Q9BZE4 634 aaKnown RBP6.22□□□□□ -1.41
PABPC1-216ENST00000520868 TASP1Q9H6P5 420 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 RPF1Q9H9Y2 349 aaKnown RBP6.22□□□□□ -1.41
PABPC1-216ENST00000520868 PLEKHA5Q9HAU0 1116 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 FBRSL1Q9HCM7 1045 aaKnown RBP6.22□□□□□ -1.41
PABPC1-216ENST00000520868 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.22□□□□□ -1.41
PABPC1-216ENST00000520868 OBP2AQ9NY56 170 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 ANGPTL2Q9UKU9 493 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 SLC8A2Q9UPR5 921 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 TNFRSF18Q9Y5U5 241 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 TICRRQ7Z2Z1 1910 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 CFAP47Q6ZTR5 3102 aa6.22□□□□□ -1.41
PABPC1-216ENST00000520868 VWA3AA6NCI4 1184 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 HNRNPDLO14979 420 aaKnown RBP6.21□□□□□ -1.42
PABPC1-216ENST00000520868 OGTO15294 1046 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 ATG13O75143 517 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 EPN2O95208 641 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 KCNK5O95279 499 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 FGF19O95750 216 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 EGFP01133 1207 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 ODC1P11926 461 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 ATF6P18850 670 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 U2AF2P26368 475 aaKnown RBP eCLIP6.21□□□□□ -1.42
PABPC1-216ENST00000520868 CDC25CP30307 473 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 NMT1P30419 496 aaKnown RBP6.21□□□□□ -1.42
PABPC1-216ENST00000520868 HOXA6P31267 233 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 AVPR1AP37288 418 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 MCM2P49736 904 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 SLC12A3P55017 1021 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 HMGN5P82970 282 aaKnown RBP6.21□□□□□ -1.42
PABPC1-216ENST00000520868 GRSF1Q12849 480 aaKnown RBP eCLIP6.21□□□□□ -1.42
PABPC1-216ENST00000520868 RUNX3Q13761 415 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 VEPH1Q14D04 833 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 STPG1Q5TH74 334 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 SPATA1Q5VX52 437 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 C9orf57Q5W0N0 161 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 TCEAL6Q6IPX3 200 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 METTL23Q86XA0 190 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 CMTM8Q8IZV2 173 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 THEM5Q8N1Q8 247 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 MYCT1Q8N699 235 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 MAB21L3Q8N8X9 362 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 STKLD1Q8NE28 680 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 TCEAL3Q969E4 200 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 MTFMTQ96DP5 389 aaKnown RBP6.21□□□□□ -1.42
PABPC1-216ENST00000520868 PBKQ96KB5 322 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 GCNAQ96QF7 691 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 MSTO1Q9BUK6 570 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 TPSD1Q9BZJ3 242 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 ZCWPW1Q9H0M4 648 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 ZHX3Q9H4I2 956 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 EBF3Q9H4W6 596 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 HPS4Q9NQG7 708 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 ASB6Q9NWX5 421 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 LARSQ9P2J5 1176 aaKnown RBP6.21□□□□□ -1.42
PABPC1-216ENST00000520868 IP6K2Q9UHH9 426 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 TBX20Q9UMR3 447 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 MAGED2Q9UNF1 606 aaPredicted RBP6.21□□□□□ -1.42
PABPC1-216ENST00000520868 CCL26Q9Y258 94 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 RAD54BQ9Y620 910 aa6.21□□□□□ -1.42
PABPC1-216ENST00000520868 CHD6Q8TD26 2715 aa6.2□□□□□ -1.42
PABPC1-216ENST00000520868 USP24Q9UPU5 2620 aa6.2□□□□□ -1.42
PABPC1-216ENST00000520868 COL4A2P08572 1712 aa6.2□□□□□ -1.42
PABPC1-216ENST00000520868 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.2□□□□□ -1.42
PABPC1-216ENST00000520868 E2F8A0AVK6 867 aa6.2□□□□□ -1.42
PABPC1-216ENST00000520868 ANKRD63C9JTQ0 380 aa6.2□□□□□ -1.42
PABPC1-216ENST00000520868 H0YCG3 227 aa6.2□□□□□ -1.42
PABPC1-216ENST00000520868 H3BUI4 141 aa6.2□□□□□ -1.42
PABPC1-216ENST00000520868 K7ENM7 598 aa6.2□□□□□ -1.42
PABPC1-216ENST00000520868 LAD1O00515 517 aa6.2□□□□□ -1.42
PABPC1-216ENST00000520868 PIRO00625 290 aa6.2□□□□□ -1.42
PABPC1-216ENST00000520868 CYB561D2O14569 222 aa6.2□□□□□ -1.42
PABPC1-216ENST00000520868 TRDMT1O14717 391 aaKnown RBP6.2□□□□□ -1.42
PABPC1-216ENST00000520868 DCLK1O15075 740 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms