RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 RNF146Q9NTX7 359 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 DLGAP2Q9P1A6 1054 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 NLKQ9UBE8 527 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 CHORDC1Q9UHD1 332 aaPredicted RBP4.22□□□□□ -1.73
SQLE-204ENST00000520493 ZNF112Q9UJU3 913 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 MTMR6Q9Y217 621 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 ADAM18Q9Y3Q7 739 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 A0A1W2PQF6 199 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 FRMD3A2A2Y4 597 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 C17orf102A2RUQ5 167 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 CBY3A6NI87 242 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 TSPY2A6NKD2 308 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 TNFRSF13BO14836 293 aaPredicted RBP4.21□□□□□ -1.74
SQLE-204ENST00000520493 GJB3O75712 270 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 OR2C1O95371 312 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 IPO7O95373 1038 aaKnown RBP4.21□□□□□ -1.74
SQLE-204ENST00000520493 TFP02787 698 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 NGFRP08138 427 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 TSPY3P0CV98 308 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 TSPY8P0CW00 308 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 PCNAP12004 261 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 SLC2A4P14672 509 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 CDAP32320 146 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 TTKP33981 857 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 PTPN9P43378 593 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 GPR12P47775 334 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 GNAQP50148 359 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 CLCNKBP51801 687 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 ZXDBP98169 803 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 TSPY1Q01534 308 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 RNPS1Q15287 305 aaKnown RBP4.21□□□□□ -1.74
SQLE-204ENST00000520493 MED22Q15528 200 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 TBC1D9BQ66K14 1250 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 TTI2Q6NXR4 508 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 PARM1Q6UWI2 310 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 FAM83HQ6ZRV2 1179 aaPredicted RBP4.21□□□□□ -1.74
SQLE-204ENST00000520493 ADGRA1Q86SQ6 560 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 FAM185AQ8N0U4 392 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 SMRP1Q8NCR6 262 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 OR4N2Q8NGD1 307 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 PSPC1Q8WXF1 523 aaKnown RBP4.21□□□□□ -1.74
SQLE-204ENST00000520493 IP6K1Q92551 441 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 ZNF419Q96HQ0 510 aaPredicted RBP4.21□□□□□ -1.74
SQLE-204ENST00000520493 CMTM3Q96MX0 182 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 CAMK1GQ96NX5 476 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 MEIS3Q99687 375 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 TEX12Q9BXU0 123 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 MAK16Q9BXY0 300 aaKnown RBP4.21□□□□□ -1.74
SQLE-204ENST00000520493 EDEM3Q9BZQ6 932 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 HIPK3Q9H422 1215 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 ACTR5Q9H9F9 607 aaPredicted RBP4.21□□□□□ -1.74
SQLE-204ENST00000520493 SCPEP1Q9HB40 452 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 SUCLA2Q9P2R7 463 aaPredicted RBP4.21□□□□□ -1.74
SQLE-204ENST00000520493 LRP12Q9Y561 859 aa4.21□□□□□ -1.74
SQLE-204ENST00000520493 ZNF644Q9H582 1327 aaPredicted RBP4.21□□□□□ -1.74
SQLE-204ENST00000520493 EME2A4GXA9 379 aaPredicted RBP4.2□□□□□ -1.74
SQLE-204ENST00000520493 CXorf65A6NEN9 183 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 UBE2CO00762 179 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 SH2B2O14492 632 aaPredicted RBP4.2□□□□□ -1.74
SQLE-204ENST00000520493 NEURL1O76050 574 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 TMCC1O94876 653 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 HSPA4LO95757 839 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 HSP90AB1P08238 724 aaKnown RBP4.2□□□□□ -1.74
SQLE-204ENST00000520493 CLTBP09497 229 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 MYZAPP0CAP1 466 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 RARGP13631 454 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 KRT10P13645 584 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 RYKP34925 604 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 SLC16A2P36021 539 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 EIF2DP41214 584 aaKnown RBP4.2□□□□□ -1.74
SQLE-204ENST00000520493 ENTPD1P49961 510 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 SCARB2Q14108 478 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 VEPH1Q14D04 833 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 SOWAHCQ53LP3 525 aaPredicted RBP4.2□□□□□ -1.74
SQLE-204ENST00000520493 ARL13AQ5H913 290 aaPredicted RBP4.2□□□□□ -1.74
SQLE-204ENST00000520493 RAB41Q5JT25 222 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 JADE1Q6IE81 842 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 KDELC2Q7Z4H8 507 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 GALNT13Q8IUC8 556 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 TEX11Q8IYF3 940 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 HACE1Q8IYU2 909 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 C17orf53Q8N3J3 647 aaPredicted RBP4.2□□□□□ -1.74
SQLE-204ENST00000520493 IQCF1Q8N6M8 205 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 TMEM217Q8N7C4 229 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 GDPD5Q8WTR4 605 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 GTF3C6Q969F1 213 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 ZNF479Q96JC4 524 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 ISCUQ9H1K1 167 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 PLEKHA4Q9H4M7 779 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 RABEP2Q9H5N1 569 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 RETREG1Q9H6L5 497 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 ZWILCHQ9H900 591 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 SPAG4Q9NPE6 437 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 KRCC1Q9NPI7 259 aaPredicted RBP4.2□□□□□ -1.74
SQLE-204ENST00000520493 CCDC177Q9NQR7 707 aaPredicted RBP4.2□□□□□ -1.74
SQLE-204ENST00000520493 SIRT3Q9NTG7 399 aaPredicted RBP4.2□□□□□ -1.74
SQLE-204ENST00000520493 PLK2Q9NYY3 685 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 FBXO4Q9UKT5 387 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 PCDHA7Q9UN72 937 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 CARD8Q9Y2G2 431 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms