RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 CAB39Q9Y376 341 aaPredicted RBP6.68□□□□□ -1.34
CPNE3-203ENST00000517490 DDX60LQ5H9U9 1706 aaKnown RBP6.68□□□□□ -1.34
CPNE3-203ENST00000517490 NCF1BA6NI72 391 aaPredicted RBP6.68□□□□□ -1.34
CPNE3-203ENST00000517490 NCF1CA8MVU1 366 aaPredicted RBP6.68□□□□□ -1.34
CPNE3-203ENST00000517490 G3V2T6 193 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 TRIM24O15164 1050 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 RECQL5O94762 991 aaPredicted RBP6.68□□□□□ -1.34
CPNE3-203ENST00000517490 MLYCDO95822 493 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 NCF1P14598 390 aaPredicted RBP6.68□□□□□ -1.34
CPNE3-203ENST00000517490 RGS4P49798 205 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 TMBIM6P55061 237 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 ATP6V0D1P61421 351 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 MBTD1Q05BQ5 628 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 DMPKQ09013 629 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 DGKZQ13574 1117 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 RBM48Q5RL73 367 aaKnown RBP6.68□□□□□ -1.34
CPNE3-203ENST00000517490 NBPF12Q5TAG4 269 aaPredicted RBP6.68□□□□□ -1.34
CPNE3-203ENST00000517490 MARC1Q5VT66 337 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 XKR5Q6UX68 686 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 GPR180Q86V85 440 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 LRRC49Q8IUZ0 686 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 FIBCD1Q8N539 461 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 CDC26Q8NHZ8 85 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 EDEM1Q92611 657 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 OTUD5Q96G74 571 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 ZNF597Q96LX8 424 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 DUSP16Q9BY84 665 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 TRIM54Q9BYV2 358 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 C6orf62Q9GZU0 229 aaPredicted RBP6.68□□□□□ -1.34
CPNE3-203ENST00000517490 SPATC1LQ9H0A9 340 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 AP5M1Q9H0R1 490 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 ADAMTS10Q9H324 1103 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 GLOD4Q9HC38 313 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 CCNB1IP1Q9NPC3 277 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 CASS4Q9NQ75 786 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 ACTR3BQ9P1U1 418 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 CDH9Q9ULB4 789 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 TLL2Q9Y6L7 1015 aa6.68□□□□□ -1.34
CPNE3-203ENST00000517490 PRSS51A0A1B0GVH4 220 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 TCRBV5S1A1TA0A578 114 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 CLPXO76031 633 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 KCNH1O95259 989 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 SMIM18P0DKX4 95 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 PTPN1P18031 435 aaKnown RBP6.67□□□□□ -1.34
CPNE3-203ENST00000517490 PTPRAP18433 802 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 CHRM3P20309 590 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 ATP4BP51164 291 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 ATXN1P54253 815 aaKnown RBP6.67□□□□□ -1.34
CPNE3-203ENST00000517490 TAS2R39P59534 338 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 CDKL1Q00532 357 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 MS4A2Q01362 244 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 FOXM1Q08050 763 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 INCA1Q0VD86 236 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 TRIM60Q495X7 471 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 PITRM1Q5JRX3 1037 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 TRIM69Q86WT6 500 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 SPATA2LQ8IUW3 424 aaPredicted RBP6.67□□□□□ -1.34
CPNE3-203ENST00000517490 B3GALNT2Q8NCR0 500 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 FBXO30Q8TB52 745 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 SLC9A7Q96T83 725 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 WDR83Q9BRX9 315 aaKnown RBP6.67□□□□□ -1.34
CPNE3-203ENST00000517490 SEMA4BQ9NPR2 832 aaPredicted RBP6.67□□□□□ -1.34
CPNE3-203ENST00000517490 TCAF1Q9Y4C2 921 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 NR2E3Q9Y5X4 410 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 UNCXA6NJT0 531 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 FBP2O00757 339 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 RAD51BO15315 384 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 MAGEB3O15480 346 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 ENDOD1O94919 500 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 CST1P01037 141 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 GJB1P08034 283 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 ARF4P18085 180 aaPredicted RBP6.67□□□□□ -1.34
CPNE3-203ENST00000517490 DNAJB13P59910 316 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 CXCL9Q07325 125 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 Q3C1V9 767 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 MAP1SQ66K74 1059 aaPredicted RBP6.67□□□□□ -1.34
CPNE3-203ENST00000517490 GLYATQ6IB77 296 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 ZNF773Q6PK81 442 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 SPESP1Q6UW49 350 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 HACD2Q6Y1H2 254 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 AMER2Q8N7J2 671 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 POC5Q8NA72 575 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 GOLM1Q8NBJ4 401 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 PSMA8Q8TAA3 256 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 TWIST2Q8WVJ9 160 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 TRUB1Q8WWH5 349 aaKnown RBP6.67□□□□□ -1.34
CPNE3-203ENST00000517490 SLC45A3Q96JT2 553 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 HGH1Q9BTY7 390 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 RIBC2Q9H4K1 309 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 PDZD7Q9H5P4 517 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 NDFIP2Q9NV92 336 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 PDE10AQ9Y233 779 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 ARIH1Q9Y4X5 557 aaPredicted RBP6.67□□□□□ -1.34
CPNE3-203ENST00000517490 SAGE2PA6NJ88 616 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 UBXN8O00124 270 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 SDHDO14521 159 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 WDR47O94967 919 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 LINC00032P0C843 101 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 BMP2P12643 396 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 CDH13P55290 713 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms