RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 VIPR2P41587 438 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 PIK3CGP48736 1102 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 PAK2Q13177 524 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 KIF22Q14807 665 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 MOGAT2Q3SYC2 334 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 KRTAP19-7Q3SYF9 63 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 AMOTQ4VCS5 1084 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 ALS2CLQ60I27 953 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 PATL1Q86TB9 770 aaKnown RBP-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 TMEM139Q8IV31 216 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 TMEM57Q8N5G2 664 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 MCPH1Q8NEM0 835 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 ZNF519Q8TB69 540 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 BPIFB1Q8TDL5 484 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 KBTBD7Q8WVZ9 684 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 FRAT1Q92837 279 aaPredicted RBP-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 PPP2R3CQ969Q6 453 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 CEP295NLQ96MC4 621 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 ZNF641Q96N77 438 aaPredicted RBP-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 GPR78Q96P69 363 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 DMRTA2Q96SC8 542 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 STOX2Q9P2F5 926 aaPredicted RBP-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 PRKAG3Q9UGI9 489 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 ACAD8Q9UKU7 415 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 CLEC4EQ9ULY5 219 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 RPH3ALQ9UNE2 315 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 ABCG2Q9UNQ0 655 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 TNFSF13BQ9Y275 285 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 JRKLQ9Y4A0 524 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 LAS1LQ9Y4W2 734 aaKnown RBP-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 PDS5AQ29RF7 1337 aaKnown RBP-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 PCLOQ9Y6V0 5065 aa-1.16□□□□□ -2.59
SNORA40.16-201ENST00000517238 GIMAP1-GIMAP5A0A087WTJ2 511 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 A0A1W2PPK0 400 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 RBMY1BA6NDE4 496 aaKnown RBP-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 RBMY1EA6NEQ0 496 aaKnown RBP-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 MFSD2BA6NFX1 497 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 MAGEB17A8MXT2 336 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 PLOD2O00469 737 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 FFAR2O15552 330 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 GJB3O75712 270 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 RBBP9O75884 186 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 UFL1O94874 794 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 AP2A2O94973 939 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 STBD1O95210 358 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 CLDN7O95471 211 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 MAP4K4O95819 1239 aaPredicted RBP-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 RBMY1DP0C7P1 496 aaKnown RBP-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 IFI30P13284 250 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 LGALS3P17931 250 aaKnown RBP-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 UQCRC1P31930 480 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 MMP12P39900 470 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 RXRGP48443 463 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 SLC12A3P55017 1021 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 EIF4A1P60842 406 aaKnown RBP-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 PSG7Q13046 419 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 DNASE1L3Q13609 305 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 PRKG1Q13976 671 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 MUM1Q2TAK8 710 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 SYTL3Q4VX76 610 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 ZNF394Q53GI3 561 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 PAMR1Q6UXH9 720 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 KIAA0907Q7Z7F0 614 aaPredicted RBP-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 CPA6Q8N4T0 437 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 METTL25Q8N6Q8 603 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 C11orf44Q8N8P7 122 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 AQP11Q8NBQ7 271 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 CEP70Q8NHQ1 597 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 DNAJB14Q8TBM8 379 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 GPT2Q8TD30 523 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 RASGRP4Q8TDF6 673 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 ASB12Q8WXK4 309 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 SLCO2A1Q92959 643 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 TNPO1Q92973 898 aaKnown RBP-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 TMEM18Q96B42 140 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 RMI2Q96E14 147 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 MAGEB18Q96M61 343 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 LRFN5Q96NI6 719 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 KRT12Q99456 494 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 MAK16Q9BXY0 300 aaKnown RBP-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 ADNPQ9H2P0 1102 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 SPHK2Q9NRA0 654 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 ST6GALNAC1Q9NSC7 600 aaPredicted RBP-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 TEX10Q9NXF1 929 aaPredicted RBP-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 FLRT3Q9NZU0 649 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 PCDHB2Q9Y5E7 798 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 TNXBP22105 4242 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 PLXNB1O43157 2135 aa-1.16□□□□□ -2.6
SNORA40.16-201ENST00000517238 LTBP4Q8N2S1 1624 aa-1.17□□□□□ -2.6
SNORA40.16-201ENST00000517238 KMT2EQ8IZD2 1858 aa-1.17□□□□□ -2.6
SNORA40.16-201ENST00000517238 F8VVB4 439 aa-1.17□□□□□ -2.6
SNORA40.16-201ENST00000517238 F8VWA3 439 aa-1.17□□□□□ -2.6
SNORA40.16-201ENST00000517238 GAS7O60861 476 aa-1.17□□□□□ -2.6
SNORA40.16-201ENST00000517238 DAB1O75553 588 aa-1.17□□□□□ -2.6
SNORA40.16-201ENST00000517238 POP4O95707 220 aaKnown RBP-1.17□□□□□ -2.6
SNORA40.16-201ENST00000517238 IGLV1-47P01700 117 aa-1.17□□□□□ -2.6
SNORA40.16-201ENST00000517238 GIG44P09565 113 aaPredicted RBP-1.17□□□□□ -2.6
SNORA40.16-201ENST00000517238 THEGLP0DJG4 465 aa-1.17□□□□□ -2.6
SNORA40.16-201ENST00000517238 XRCC6P12956 609 aaKnown RBP eCLIP-1.17□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms