RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 KCNG4Q8TDN1 519 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 AFAP1L1Q8TED9 768 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 SIPA1Q96FS4 1042 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 MRGPRX1Q96LB2 322 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 PSD2Q9BQI7 771 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 SYT17Q9BSW7 474 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 MMTAG2Q9BU76 263 aaKnown RBP-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 TARS2Q9BW92 718 aaKnown RBP-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 CLEC7AQ9BXN2 247 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 WWTR1Q9GZV5 400 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 PLSCR3Q9NRY6 295 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 RCC2Q9P258 522 aaKnown RBP-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 KLHL42Q9P2K6 505 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 NAALAD2Q9Y3Q0 740 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 MAGED1Q9Y5V3 778 aaPredicted RBP-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 WIF1Q9Y5W5 379 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 LOC102723971A0A1B0GUV8 181 aa-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 PLRG1O43660 514 aaKnown RBP-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 ZIC3O60481 467 aa-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 GALR3O60755 368 aaPredicted RBP-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 NGFP01138 241 aa-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 NR3C1P04150 777 aa-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 GIG44P09565 113 aaPredicted RBP-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 ZCCHC18P0CG32 403 aa-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 IGHV4-38-2P0DP08 117 aa-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 ITGA3P26006 1051 aa-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 GNL1P36915 607 aaPredicted RBP-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 UBA7P41226 1012 aa-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 CHAF1AQ13111 956 aaPredicted RBP-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 TMEM196Q5HYL7 178 aa-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 UTF1Q5T230 341 aa-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 ATAD3CQ5T2N8 411 aa-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 MANEALQ5VSG8 457 aa-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 ERAP2Q6P179 960 aa-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 TIPARPQ7Z3E1 657 aaKnown RBP-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 RTL3Q8N8U3 475 aaKnown RBP-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 CEP70Q8NHQ1 597 aa-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 DEDD2Q8WXF8 326 aa-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 RSC1A1Q92681 617 aa-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 CENPTQ96BT3 561 aa-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 DEPDC7Q96QD5 511 aa-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 SNTG2Q9NY99 539 aa-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 CNTN6Q9UQ52 1028 aa-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 PLEKHA6Q9Y2H5 1048 aa-0.89□□□□□ -2.55
RNU6-539P-201ENST00000516665 IGLV3-16A0A075B6K0 115 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 A0A0U1RQK1 487 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 A8MZ25 164 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 E7ENQ6 273 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 PLOD2O00469 737 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 ZNF324O75467 553 aaPredicted RBP-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 DHRS4L1P0CG22 281 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 PNMTP11086 282 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 HARSP12081 509 aaKnown RBP-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 NR2C1P13056 603 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 TBPP20226 339 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 MMP8P22894 467 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 PIGAP37287 484 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 MAP2K6P52564 334 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 ARFIP2P53365 341 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 NKX6-1P78426 367 aaPredicted RBP-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 KCNJ10P78508 379 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 MOBPQ13875 183 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 GTF2H2Q13888 395 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 E2F5Q15329 346 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 C21orf62-AS1Q17RA5 79 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 CCDC96Q2M329 555 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 KRTAP6-1Q3LI64 71 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 TTC19Q6DKK2 380 aaPredicted RBP-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 TRNP1Q6NT89 227 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 GTF2H2CQ6P1K8 395 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 XRRA1Q6P2D8 792 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 SHFQ7M4L6 423 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 DENND6AQ8IWF6 608 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 CHERPQ8IWX8 916 aaKnown RBP-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 ZNF34Q8IZ26 560 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 DCLK2Q8N568 766 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 OR52I2Q8NH67 350 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 FAM110DQ8TAY7 271 aaPredicted RBP-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 CHPT1Q8WUD6 406 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 MAGED4Q96JG8 741 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 TMX4Q9H1E5 349 aaPredicted RBP-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 PCDH9Q9HC56 1237 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 RXFP3Q9NSD7 469 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 NECAP2Q9NVZ3 263 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 THYN1Q9P016 225 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 UBIAD1Q9Y5Z9 338 aa-0.9□□□□□ -2.55
RNU6-539P-201ENST00000516665 H3BUI4 141 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 FOXE1O00358 373 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 BTN3A1O00481 513 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 RNMTO43148 476 aaKnown RBP-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 TGFB1I1O43294 461 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 SEC31AO94979 1220 aaKnown RBP-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 FTLP02792 175 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 KRT3P12035 628 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 RGRP47804 291 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 LEPRP48357 1165 aaKnown RBP-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 CYP2J2P51589 502 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 TBX4P57082 545 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 FAM27E3Q08E93 113 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 SQSTM1Q13501 440 aa-0.91□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms