RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 P4HA3Q7Z4N8 544 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 DEFB119Q8N690 84 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 ATAD1Q8NBU5 361 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 HMGB4Q8WW32 186 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 HDAC10Q969S8 669 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 FEM1CQ96JP0 617 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 IL25Q9H293 177 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 RPS6KA6Q9UK32 745 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 TRIM3O75382 744 aaPredicted RBP11.04□□□□□ -0.64
TRIM41-209ENST00000515834 DBIP07108 87 aaKnown RBP11.04□□□□□ -0.64
TRIM41-209ENST00000515834 CTBP1Q13363 440 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 MSLNQ13421 630 aaPredicted RBP11.04□□□□□ -0.64
TRIM41-209ENST00000515834 CAPSQ13938 189 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 RBFAQ8N0V3 343 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 RP9Q8TA86 221 aaKnown RBP11.04□□□□□ -0.64
TRIM41-209ENST00000515834 ZNF607Q96SK3 696 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 DCUN1D5Q9BTE7 237 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 CD248Q9HCU0 757 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 ACP6Q9NPH0 428 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 PCDHGA3Q9Y5H0 932 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 NPEPPSL1A6NEC2 478 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 SIGLEC16A6NMB1 481 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 BTBD19C9JJ37 291 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 DDX3XO00571 662 aaKnown RBP eCLIP11.04□□□□□ -0.64
TRIM41-209ENST00000515834 FAM58BPP0C7Q3 252 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 ATP5F1P24539 256 aaPredicted RBP11.04□□□□□ -0.64
TRIM41-209ENST00000515834 PGDP52209 483 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 SEMA5AQ13591 1074 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 RFWD3Q6PCD5 774 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 KDM7AQ6ZMT4 941 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 FAM35AQ86V20 835 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 BHLHE22Q8NFJ8 381 aaPredicted RBP11.04□□□□□ -0.64
TRIM41-209ENST00000515834 BPIFB6Q8NFQ5 453 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 AP2M1Q96CW1 435 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 DHRS1Q96LJ7 313 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 PTPN18Q99952 460 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 AIF1LQ9BQI0 150 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 NINJ2Q9NZG7 142 aa11.04□□□□□ -0.64
TRIM41-209ENST00000515834 ATG13O75143 517 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 INHAP05111 366 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 CCNA2P20248 432 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 ARHGDIBP52566 201 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 SNX20Q7Z614 316 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 FCRL2Q96LA5 508 aaPredicted RBP11.03□□□□□ -0.64
TRIM41-209ENST00000515834 YDJCA8MPS7 323 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 PSMD9O00233 223 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 NRF1Q16656 503 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 GALNTL5Q7Z4T8 443 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 OAFQ86UD1 273 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 PARP8Q8N3A8 854 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 OR5T3Q8NGG3 340 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 ADAMTS15Q8TE58 950 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 KCTD4Q8WVF5 259 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 QKIQ96PU8 341 aaKnown RBP eCLIP11.03□□□□□ -0.64
TRIM41-209ENST00000515834 TMEM51Q9NW97 253 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 COPS7AQ9UBW8 275 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 CORO2BQ9UQ03 480 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 SERPINB7O75635 380 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 RECQL5O94762 991 aaPredicted RBP11.03□□□□□ -0.64
TRIM41-209ENST00000515834 CHRNGP07510 517 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 CLCN5P51795 746 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 PTENP60484 403 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 USP46P62068 366 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 MRPS35P82673 323 aaKnown RBP11.03□□□□□ -0.64
TRIM41-209ENST00000515834 ILF3Q12906 894 aaKnown RBP eCLIP11.03□□□□□ -0.64
TRIM41-209ENST00000515834 GFOD2Q3B7J2 385 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 CCNYL2Q5T2Q4 361 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 EXOC3L1Q86VI1 746 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 PPP3R2Q96LZ3 170 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 RNF121Q9H920 327 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 CHMP1AQ9HD42 196 aaPredicted RBP11.03□□□□□ -0.64
TRIM41-209ENST00000515834 IKZF2Q9UKS7 526 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 ASTN2O75129 1339 aaPredicted RBP11.03□□□□□ -0.64
TRIM41-209ENST00000515834 H7C0S8 307 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 TIE1P35590 1138 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 SAMD4BQ5PRF9 694 aaKnown RBP11.03□□□□□ -0.64
TRIM41-209ENST00000515834 CHST15Q7LFX5 561 aaPredicted RBP11.03□□□□□ -0.64
TRIM41-209ENST00000515834 PLPPR4Q7Z2D5 763 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 NANOGNBQ7Z5D8 188 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 VSIG10LQ86VR7 867 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 CLHC1Q8NHS4 586 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 HCAR2Q8TDS4 363 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 SLC25A23Q9BV35 468 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 EHD3Q9NZN3 535 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 MAPRE3Q9UPY8 281 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 PCDHGB3Q9Y5G1 929 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 TARBP1Q13395 1621 aaKnown RBP11.03□□□□□ -0.64
TRIM41-209ENST00000515834 CLDN4O14493 209 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 CDK14O94921 469 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 PTPN2P17706 415 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 MYL9P24844 172 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 SLC7A2P52569 658 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 PTPN5P54829 565 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 FKBP1BP68106 108 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 ADRM1Q16186 407 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 C2orf27AQ580R0 203 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 RNASE12Q5GAN4 147 aaKnown RBP11.03□□□□□ -0.64
TRIM41-209ENST00000515834 SPANXN2Q5MJ10 180 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 PPP1R15BQ5SWA1 713 aa11.03□□□□□ -0.64
TRIM41-209ENST00000515834 CAPN13Q6MZZ7 669 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms