RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 TAF15Q92804 592 aaKnown RBP eCLIP3.91□□□□□ -1.78
LINC01088-211ENST00000515597 TANKQ92844 425 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 GCC1Q96CN9 775 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 CSF3RQ99062 836 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 MMP28Q9H239 520 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 SCRT2Q9NQ03 307 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 BABAM1Q9NWV8 329 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 CISD1Q9NZ45 108 aaKnown RBP3.91□□□□□ -1.78
LINC01088-211ENST00000515597 PEMTQ9UBM1 199 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 DGKBQ9Y6T7 804 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 SYNJ2O15056 1496 aa3.91□□□□□ -1.78
LINC01088-211ENST00000515597 ARID4BQ4LE39 1312 aaPredicted RBP3.91□□□□□ -1.78
LINC01088-211ENST00000515597 ATXN2Q99700 1313 aaKnown RBP3.91□□□□□ -1.78
LINC01088-211ENST00000515597 DISP3Q9P2K9 1392 aa3.9□□□□□ -1.78
LINC01088-211ENST00000515597 ERCC6L2Q5T890 1561 aa3.9□□□□□ -1.78
LINC01088-211ENST00000515597 MID1O15344 667 aa3.9□□□□□ -1.79
LINC01088-211ENST00000515597 PLRG1O43660 514 aaKnown RBP3.9□□□□□ -1.79
LINC01088-211ENST00000515597 TIPRLO75663 272 aa3.9□□□□□ -1.79
LINC01088-211ENST00000515597 RFPL2O75678 378 aa3.9□□□□□ -1.79
LINC01088-211ENST00000515597 CFC1BP0CG36 223 aa3.9□□□□□ -1.79
LINC01088-211ENST00000515597 CFC1P0CG37 223 aa3.9□□□□□ -1.79
LINC01088-211ENST00000515597 CCR5P51681 352 aa3.9□□□□□ -1.79
LINC01088-211ENST00000515597 UBE3AQ05086 875 aa3.9□□□□□ -1.79
LINC01088-211ENST00000515597 ZBTB17Q13105 803 aa3.9□□□□□ -1.79
LINC01088-211ENST00000515597 DMP1Q13316 513 aaPredicted RBP3.9□□□□□ -1.79
LINC01088-211ENST00000515597 NEDD9Q14511 834 aa3.9□□□□□ -1.79
LINC01088-211ENST00000515597 TAF11Q15544 211 aa3.9□□□□□ -1.79
LINC01088-211ENST00000515597 KRTAP5-4Q6L8H1 288 aa3.9□□□□□ -1.79
LINC01088-211ENST00000515597 FOXL2NBQ6ZUU3 175 aa3.9□□□□□ -1.79
LINC01088-211ENST00000515597 TADA2BQ86TJ2 420 aa3.9□□□□□ -1.79
LINC01088-211ENST00000515597 CPOQ8IVL8 374 aa3.9□□□□□ -1.79
LINC01088-211ENST00000515597 PLD5Q8N7P1 536 aa3.9□□□□□ -1.79
LINC01088-211ENST00000515597 MYRIPQ8NFW9 859 aa3.9□□□□□ -1.79
LINC01088-211ENST00000515597 C3orf30Q96M34 536 aa3.9□□□□□ -1.79
LINC01088-211ENST00000515597 MYH16Q9H6N6 1097 aa3.9□□□□□ -1.79
LINC01088-211ENST00000515597 DDX4Q9NQI0 724 aaKnown RBP3.9□□□□□ -1.79
LINC01088-211ENST00000515597 SNTG1Q9NSN8 517 aa3.9□□□□□ -1.79
LINC01088-211ENST00000515597 IL1RAPL1Q9NZN1 696 aa3.9□□□□□ -1.79
LINC01088-211ENST00000515597 VDAC3Q9Y277 283 aa3.9□□□□□ -1.79
LINC01088-211ENST00000515597 RSF1Q96T23 1441 aaPredicted RBP3.89□□□□□ -1.79
LINC01088-211ENST00000515597 ZNF587BE7ETH6 402 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 SOCS6O14544 535 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 HEXAP06865 529 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 MMP2P08253 660 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 ETFAP13804 333 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 GM2AP17900 193 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 EDN2P20800 178 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 STX2P32856 288 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 PSMC2P35998 433 aaKnown RBP3.89□□□□□ -1.79
LINC01088-211ENST00000515597 ZNF132P52740 706 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 NLRP5P59047 1200 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 EFNB1P98172 346 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.89□□□□□ -1.79
LINC01088-211ENST00000515597 ITGADQ13349 1161 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 ZNF766Q5HY98 468 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 PAPPA-AS1Q5QFB9 102 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 GDPD4Q6W3E5 623 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 MARK2Q7KZI7 788 aaKnown RBP3.89□□□□□ -1.79
LINC01088-211ENST00000515597 GPAT4Q86UL3 456 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 NOXA1Q86UR1 476 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 SMAP1Q8IYB5 467 aaPredicted RBP3.89□□□□□ -1.79
LINC01088-211ENST00000515597 MAB21L3Q8N8X9 362 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 KBTBD3Q8NAB2 608 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 SCCPDHQ8NBX0 429 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 C11orf65Q8NCR3 313 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 AGBL3Q8NEM8 1001 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 FIG4Q92562 907 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 FBXL8Q96CD0 374 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 FEM1CQ96JP0 617 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 C17orf75Q9HAS0 396 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 RIC8AQ9NPQ8 531 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 BEX4Q9NWD9 120 aaPredicted RBP3.89□□□□□ -1.79
LINC01088-211ENST00000515597 C1RLQ9NZP8 487 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 LUZP4Q9P127 313 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 HCN3Q9P1Z3 774 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 GAB2Q9UQC2 676 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 CHD1O14646 1710 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 CGNL1Q0VF96 1302 aa3.89□□□□□ -1.79
LINC01088-211ENST00000515597 TP53BP1Q12888 1972 aaPredicted RBP3.89□□□□□ -1.79
LINC01088-211ENST00000515597 KIF13AQ9H1H9 1805 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 A0A0G2JPF8 293 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 ANTXRLA6NF34 631 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 GAGE10A6NGK3 116 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 HNRNPCL3B7ZW38 293 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 TAF4O00268 1085 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 EIF3FO00303 357 aaPredicted RBP3.88□□□□□ -1.79
LINC01088-211ENST00000515597 HNRNPCL1O60812 293 aaKnown RBP3.88□□□□□ -1.79
LINC01088-211ENST00000515597 GUCY1B2O75343 617 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 LDLRP01130 860 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 HNRNPCL4P0DMR1 293 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 AGAP20933 346 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 ANOS1P23352 680 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 MCM3P25205 808 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 TAF6P49848 677 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 GRIK3Q13003 919 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 LRRC8EQ6NSJ5 796 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 ANKRD54Q6NXT1 300 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 B3GNT6Q6ZMB0 384 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 MTSS1LQ765P7 747 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 LRRC8DQ7L1W4 858 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms