RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 A0A0J9YYE9 177 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 KCNK1O00180 336 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 ENC1O14682 589 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 SCAMP1O15126 338 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 SDC3O75056 442 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 JCHAINP01591 159 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 TRBC1P01850 177 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 PRKCGP05129 697 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 ATXN1LP0C7T5 689 aaKnown RBP12.81□□□□□ -0.36
CLCN3-210ENST00000515420 ALPPL2P10696 532 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 GM2AP17900 193 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 HTR1BP28222 390 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 TEAD1P28347 426 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 TRIM23P36406 574 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 MARCKSL1P49006 195 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 BLKP51451 505 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 NAP1L1P55209 391 aaKnown RBP12.81□□□□□ -0.36
CLCN3-210ENST00000515420 KIAA1024LP59773 190 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 DYNLT1P63172 113 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 NIPAL4Q0D2K0 466 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 ZBTB17Q13105 803 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 EIF2B5Q13144 721 aaKnown RBP12.81□□□□□ -0.36
CLCN3-210ENST00000515420 ARHGEF7Q14155 803 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 NFATC4Q14934 902 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 CNGA3Q16281 694 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 TPRG1LQ5T0D9 272 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 NPNTQ6UXI9 565 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 BBS12Q6ZW61 710 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 SLCO6A1Q86UG4 719 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 CCDC50Q8IVM0 306 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 SLC25A45Q8N413 288 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 EID2Q8N6I1 236 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 CNTD1Q8N815 330 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 KRT35Q92764 455 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 LYSMD1Q96S90 227 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 VAT1Q99536 393 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 SCNM1Q9BWG6 230 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 USP29Q9HBJ7 922 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 TTLL3Q9Y4R7 772 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 GOLGA4Q13439 2230 aaKnown RBP12.81□□□□□ -0.36
CLCN3-210ENST00000515420 SPEGQ15772 3267 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 ACACBO00763 2458 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 CAPN8A6NHC0 703 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 NPIPB15A6NHN6 443 aaPredicted RBP12.8□□□□□ -0.36
CLCN3-210ENST00000515420 MIF4GDA9UHW6 222 aaKnown RBP12.8□□□□□ -0.36
CLCN3-210ENST00000515420 HACD1B0YJ81 288 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 APOC4-APOC2K7ER74 178 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 TPP1O14773 563 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 AQP9O43315 295 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 PRLP01236 227 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 APOC2P02655 101 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 MMP2P08253 660 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 PDHA1P08559 390 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 TSHRP16473 764 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 JUNDP17535 347 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 CKMT2P17540 419 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 KELP23276 732 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 CETN2P41208 172 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 EPHB1P54762 984 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 RWDD2BP57060 319 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 ILKQ13418 452 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 XRCC4Q13426 336 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 IHHQ14623 411 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 INPP5AQ14642 412 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 ACOX1Q15067 660 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 PROX2Q3B8N5 592 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 TEX44Q53QW1 395 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 KAZNQ674X7 775 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 NT5DC3Q86UY8 548 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 PHACTR4Q8IZ21 702 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 SDR16C5Q8N3Y7 309 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 FAM181AQ8N9Y4 354 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 CCDC112Q8NEF3 446 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 ZNF548Q8NEK5 533 aaPredicted RBP12.8□□□□□ -0.36
CLCN3-210ENST00000515420 TFB1MQ8WVM0 346 aaKnown RBP12.8□□□□□ -0.36
CLCN3-210ENST00000515420 NUS1Q96E22 293 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 DTD2Q96FN9 168 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 IMP4Q96G21 291 aaKnown RBP12.8□□□□□ -0.36
CLCN3-210ENST00000515420 APOOQ9BUR5 198 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 TSGA10Q9BZW7 698 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 SLC25A51Q9H1U9 297 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 PCDH9Q9HC56 1237 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 EVA1BQ9NVM1 165 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 NCKIPSDQ9NZQ3 722 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 SPASTQ9UBP0 616 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 APOBEC3BQ9UH17 382 aaKnown RBP12.8□□□□□ -0.36
CLCN3-210ENST00000515420 MSRB2Q9Y3D2 182 aa12.8□□□□□ -0.36
CLCN3-210ENST00000515420 GRID2IPA4D2P6 1211 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 PDE2AO00408 941 aaPredicted RBP12.79□□□□□ -0.36
CLCN3-210ENST00000515420 TNFRSF10CO14798 259 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 ARHGAP6O43182 974 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 HYAL3O43820 417 aaPredicted RBP12.79□□□□□ -0.36
CLCN3-210ENST00000515420 RFPL3O75679 317 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 ZNF189O75820 626 aaPredicted RBP12.79□□□□□ -0.36
CLCN3-210ENST00000515420 PCCBP05166 539 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 GIMD1P0DJR0 217 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 PECAM1P16284 738 aaPredicted RBP12.79□□□□□ -0.36
CLCN3-210ENST00000515420 LHCGRP22888 699 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 ACP1P24666 158 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 HNF1BP35680 557 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms