RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 IL10RBQ08334 325 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 ARHGEF7Q14155 803 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 LY6DQ14210 128 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 ZSCAN23Q3MJ62 389 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 C14orf28Q4W4Y0 310 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 RALGPS1Q5JS13 557 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 LRRC73Q5JTD7 316 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 ERMARDQ5T6L9 678 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 LIPIQ6XZB0 460 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 DPPA4Q7L190 304 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 C17orf82Q86X59 251 aaPredicted RBP12.62□□□□□ -0.39
VEGFA-216ENST00000512683 ZSCAN1Q8NBB4 408 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 FNIP1Q8TF40 1166 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 FUBP1Q96AE4 644 aaKnown RBP12.62□□□□□ -0.39
VEGFA-216ENST00000512683 PSKH2Q96QS6 385 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 DPYSL5Q9BPU6 564 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 TRNAU1APQ9NX07 287 aaKnown RBP12.62□□□□□ -0.39
VEGFA-216ENST00000512683 AIPL1Q9NZN9 384 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 SIRPGQ9P1W8 387 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 LRIT1Q9P2V4 623 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 RABGEF1Q9UJ41 708 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 COQ6Q9Y2Z9 468 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 MGAQ8IWI9 3026 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 SPTA1P02549 2419 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 EEF2KO00418 725 aaKnown RBP12.61□□□□□ -0.39
VEGFA-216ENST00000512683 DAPK3O43293 454 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 RNF8O76064 485 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 CELA2BP08218 269 aaPredicted RBP12.61□□□□□ -0.39
VEGFA-216ENST00000512683 ELFN1P0C7U0 828 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 TNFAIP3P21580 790 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 PRKCIP41743 596 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 GPR3P46089 330 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 MAMLD1Q13495 774 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 SQSTM1Q13501 440 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 HLTFQ14527 1009 aaKnown RBP eCLIP12.61□□□□□ -0.39
VEGFA-216ENST00000512683 NR1I3Q14994 352 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 PNCKQ6P2M8 343 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 ZNF571Q7Z3V5 609 aaPredicted RBP12.61□□□□□ -0.39
VEGFA-216ENST00000512683 B3GNT8Q7Z7M8 397 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 PIM3Q86V86 326 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 CBARPQ8N350 705 aaPredicted RBP12.61□□□□□ -0.39
VEGFA-216ENST00000512683 ARFGAP1Q8N6T3 406 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 TSEN2Q8NCE0 465 aaKnown RBP12.61□□□□□ -0.39
VEGFA-216ENST00000512683 GPBAR1Q8TDU6 330 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 OR1E3Q8WZA6 343 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 COL26A1Q96A83 441 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 CINPQ9BW66 212 aaPredicted RBP12.61□□□□□ -0.39
VEGFA-216ENST00000512683 SEMA4CQ9C0C4 833 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 SLC39A8Q9C0K1 460 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 DPEP2Q9H4A9 486 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 CLMPQ9H6B4 373 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 HAUS4Q9H6D7 363 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 WDR26Q9H7D7 661 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 SYNDIG1Q9H7V2 258 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 SEPT3Q9UH03 358 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 LOXL2Q9Y4K0 774 aa12.61□□□□□ -0.39
VEGFA-216ENST00000512683 TMEM202A6NGA9 273 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 TMCO5BA8MYB1 307 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 PSMD11O00231 422 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 TRAFD1O14545 582 aaPredicted RBP12.6□□□□□ -0.39
VEGFA-216ENST00000512683 HGSO14964 777 aaPredicted RBP12.6□□□□□ -0.39
VEGFA-216ENST00000512683 HTRA2O43464 458 aaPredicted RBP12.6□□□□□ -0.39
VEGFA-216ENST00000512683 SOCS5O75159 536 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 WISP1O95388 367 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 ZIC2O95409 532 aaPredicted RBP12.6□□□□□ -0.39
VEGFA-216ENST00000512683 CPNE6O95741 557 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 PCCBP05166 539 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 GZMAP12544 262 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 KRT10P13645 584 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 TRA2AQ13595 282 aaKnown RBP eCLIP12.6□□□□□ -0.39
VEGFA-216ENST00000512683 NR1D2Q14995 579 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 FILIP1LQ4L180 1135 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 KIAA1614Q5VZ46 1190 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 PLEKHA7Q6IQ23 1121 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 RFX8Q6ZV50 586 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 SPRED1Q7Z699 444 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 NLRP8Q86W28 1048 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 DTX1Q86Y01 620 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 JAMLQ86YT9 394 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 LRRC49Q8IUZ0 686 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 RAVER1Q8IY67 606 aaKnown RBP12.6□□□□□ -0.39
VEGFA-216ENST00000512683 BBS5Q8N3I7 341 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 EXOC2Q96KP1 924 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 GSDMCQ9BYG8 508 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 FOXP3Q9BZS1 431 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 DHX35Q9H5Z1 703 aaKnown RBP12.6□□□□□ -0.39
VEGFA-216ENST00000512683 SP110Q9HB58 689 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 FGF22Q9HCT0 170 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 PHPT1Q9NRX4 125 aaPredicted RBP12.6□□□□□ -0.39
VEGFA-216ENST00000512683 AP4E1Q9UPM8 1137 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 AHCTF1Q8WYP5 2266 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 SHROOM3Q8TF72 1996 aa12.6□□□□□ -0.39
VEGFA-216ENST00000512683 TMEM191CA6NGB0 347 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 DDX3XO00571 662 aaKnown RBP eCLIP12.59□□□□□ -0.39
VEGFA-216ENST00000512683 ATMINO43313 823 aaPredicted RBP12.59□□□□□ -0.39
VEGFA-216ENST00000512683 PRPSAP2O60256 369 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 MYCLP1P12525 358 aaPredicted RBP12.59□□□□□ -0.39
VEGFA-216ENST00000512683 CCNB1P14635 433 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 ERCC2P18074 760 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 PSMA2P25787 234 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms