RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 PHF7Q9BWX1 381 aaPredicted RBP4.75□□□□□ -1.65
PDE4D-220ENST00000512069 SLCO5A1Q9H2Y9 848 aa4.75□□□□□ -1.65
PDE4D-220ENST00000512069 EPHX3Q9H6B9 360 aa4.75□□□□□ -1.65
PDE4D-220ENST00000512069 ANKRD10Q9NXR5 420 aa4.75□□□□□ -1.65
PDE4D-220ENST00000512069 ALKBH4Q9NXW9 302 aa4.75□□□□□ -1.65
PDE4D-220ENST00000512069 AGO1Q9UL18 857 aaKnown RBP4.75□□□□□ -1.65
PDE4D-220ENST00000512069 EIF3FO00303 357 aaPredicted RBP4.74□□□□□ -1.65
PDE4D-220ENST00000512069 PER2O15055 1255 aa4.74□□□□□ -1.65
PDE4D-220ENST00000512069 SLC25A17O43808 307 aa4.74□□□□□ -1.65
PDE4D-220ENST00000512069 ZNF12P17014 697 aa4.74□□□□□ -1.65
PDE4D-220ENST00000512069 RYKP34925 604 aa4.74□□□□□ -1.65
PDE4D-220ENST00000512069 GPD2P43304 727 aa4.74□□□□□ -1.65
PDE4D-220ENST00000512069 CCR5P51681 352 aa4.74□□□□□ -1.65
PDE4D-220ENST00000512069 SEC61A1P61619 476 aaKnown RBP4.74□□□□□ -1.65
PDE4D-220ENST00000512069 TRAF3Q13114 568 aa4.74□□□□□ -1.65
PDE4D-220ENST00000512069 CTTNQ14247 550 aaKnown RBP4.74□□□□□ -1.65
PDE4D-220ENST00000512069 DHX8Q14562 1220 aaKnown RBP4.74□□□□□ -1.65
PDE4D-220ENST00000512069 ATG16L1Q676U5 607 aa4.74□□□□□ -1.65
PDE4D-220ENST00000512069 NADSYN1Q6IA69 706 aa4.74□□□□□ -1.65
PDE4D-220ENST00000512069 DENND6AQ8IWF6 608 aa4.74□□□□□ -1.65
PDE4D-220ENST00000512069 MIGA1Q8NAN2 632 aa4.74□□□□□ -1.65
PDE4D-220ENST00000512069 NEXN-AS1Q8NBZ9 246 aa4.74□□□□□ -1.65
PDE4D-220ENST00000512069 GDPD5Q8WTR4 605 aa4.74□□□□□ -1.65
PDE4D-220ENST00000512069 SCLT1Q96NL6 688 aa4.74□□□□□ -1.65
PDE4D-220ENST00000512069 YME1L1Q96TA2 773 aa4.74□□□□□ -1.65
PDE4D-220ENST00000512069 KRTAP2-2Q9BYT5 123 aa4.74□□□□□ -1.65
PDE4D-220ENST00000512069 TM6SF1Q9BZW5 370 aa4.74□□□□□ -1.65
PDE4D-220ENST00000512069 MROH8Q9H579 483 aa4.74□□□□□ -1.65
PDE4D-220ENST00000512069 CLK4Q9HAZ1 481 aaKnown RBP4.74□□□□□ -1.65
PDE4D-220ENST00000512069 TMEM160Q9NX00 188 aa4.74□□□□□ -1.65
PDE4D-220ENST00000512069 STK26Q9P289 416 aa4.74□□□□□ -1.65
PDE4D-220ENST00000512069 PROCRQ9UNN8 238 aa4.74□□□□□ -1.65
PDE4D-220ENST00000512069 PCDHGB5Q9Y5G0 923 aa4.74□□□□□ -1.65
PDE4D-220ENST00000512069 GPRASP1Q5JY77 1395 aa4.74□□□□□ -1.65
PDE4D-220ENST00000512069 ABCC11Q96J66 1382 aa4.74□□□□□ -1.65
PDE4D-220ENST00000512069 PIK3C2AO00443 1686 aa4.73□□□□□ -1.65
PDE4D-220ENST00000512069 ANKARQ7Z5J8 1434 aa4.73□□□□□ -1.65
PDE4D-220ENST00000512069 KDM4EB2RXH2 506 aaPredicted RBP4.73□□□□□ -1.65
PDE4D-220ENST00000512069 CEP104O60308 925 aa4.73□□□□□ -1.65
PDE4D-220ENST00000512069 FGF3P11487 239 aaPredicted RBP4.73□□□□□ -1.65
PDE4D-220ENST00000512069 FCGR1AP12314 374 aa4.73□□□□□ -1.65
PDE4D-220ENST00000512069 ZNF8P17098 575 aaPredicted RBP4.73□□□□□ -1.65
PDE4D-220ENST00000512069 PTPN2P17706 415 aa4.73□□□□□ -1.65
PDE4D-220ENST00000512069 CYP4A11Q02928 519 aa4.73□□□□□ -1.65
PDE4D-220ENST00000512069 TLE2Q04725 743 aa4.73□□□□□ -1.65
PDE4D-220ENST00000512069 KIF5AQ12840 1032 aa4.73□□□□□ -1.65
PDE4D-220ENST00000512069 CAPSQ13938 189 aa4.73□□□□□ -1.65
PDE4D-220ENST00000512069 NFATC4Q14934 902 aa4.73□□□□□ -1.65
PDE4D-220ENST00000512069 ZRSR2Q15696 482 aaKnown RBP4.73□□□□□ -1.65
PDE4D-220ENST00000512069 EDRF1Q3B7T1 1238 aa4.73□□□□□ -1.65
PDE4D-220ENST00000512069 EFHC1Q5JVL4 640 aa4.73□□□□□ -1.65
PDE4D-220ENST00000512069 ADGRG6Q86SQ4 1221 aa4.73□□□□□ -1.65
PDE4D-220ENST00000512069 MON1AQ86VX9 555 aa4.73□□□□□ -1.65
PDE4D-220ENST00000512069 RBMXL3Q8N7X1 1067 aaKnown RBP4.73□□□□□ -1.65
PDE4D-220ENST00000512069 UBXN10Q96LJ8 280 aa4.73□□□□□ -1.65
PDE4D-220ENST00000512069 NDRG3Q9UGV2 375 aa4.73□□□□□ -1.65
PDE4D-220ENST00000512069 COL5A2P05997 1499 aaPredicted RBP4.73□□□□□ -1.65
PDE4D-220ENST00000512069 PCNTO95613 3336 aa4.73□□□□□ -1.65
PDE4D-220ENST00000512069 TNRC6CQ9HCJ0 1690 aaKnown RBP4.73□□□□□ -1.65
PDE4D-220ENST00000512069 CRB1P82279 1406 aa4.72□□□□□ -1.65
PDE4D-220ENST00000512069 TRPM1Q7Z4N2 1603 aa4.72□□□□□ -1.65
PDE4D-220ENST00000512069 PKD1L3Q7Z443 1732 aa4.72□□□□□ -1.65
PDE4D-220ENST00000512069 NOTCH4Q99466 2003 aa4.72□□□□□ -1.65
PDE4D-220ENST00000512069 IGLV5-52A0A0A0MRZ9 124 aa4.72□□□□□ -1.65
PDE4D-220ENST00000512069 CBY3A6NI87 242 aa4.72□□□□□ -1.65
PDE4D-220ENST00000512069 TEX22C9J3V5 150 aa4.72□□□□□ -1.65
PDE4D-220ENST00000512069 KCNJ13O60928 360 aa4.72□□□□□ -1.65
PDE4D-220ENST00000512069 GUCY1B2O75343 617 aa4.72□□□□□ -1.65
PDE4D-220ENST00000512069 PAPSS2O95340 614 aaPredicted RBP4.72□□□□□ -1.65
PDE4D-220ENST00000512069 PSMC2P35998 433 aaKnown RBP4.72□□□□□ -1.65
PDE4D-220ENST00000512069 CXCR3P49682 368 aa4.72□□□□□ -1.65
PDE4D-220ENST00000512069 RGS19P49795 217 aa4.72□□□□□ -1.65
PDE4D-220ENST00000512069 MXI1P50539 228 aa4.72□□□□□ -1.65
PDE4D-220ENST00000512069 YWHAZP63104 245 aaKnown RBP4.72□□□□□ -1.65
PDE4D-220ENST00000512069 PLCB4Q15147 1175 aa4.72□□□□□ -1.65
PDE4D-220ENST00000512069 CAPRIN2Q6IMN6 1127 aaKnown RBP4.72□□□□□ -1.65
PDE4D-220ENST00000512069 RETSATQ6NUM9 610 aa4.72□□□□□ -1.65
PDE4D-220ENST00000512069 LRRC8DQ7L1W4 858 aa4.72□□□□□ -1.65
PDE4D-220ENST00000512069 LRRTM4Q86VH4 590 aa4.72□□□□□ -1.65
PDE4D-220ENST00000512069 TNIP2Q8NFZ5 429 aa4.72□□□□□ -1.65
PDE4D-220ENST00000512069 SNAPC3Q92966 411 aa4.72□□□□□ -1.65
PDE4D-220ENST00000512069 ABHD8Q96I13 439 aa4.72□□□□□ -1.65
PDE4D-220ENST00000512069 MAELQ96JY0 434 aaKnown RBP4.72□□□□□ -1.65
PDE4D-220ENST00000512069 POLR3GLQ9BT43 218 aa4.72□□□□□ -1.65
PDE4D-220ENST00000512069 SLC32A1Q9H598 525 aa4.72□□□□□ -1.65
PDE4D-220ENST00000512069 TMEM51Q9NW97 253 aa4.72□□□□□ -1.65
PDE4D-220ENST00000512069 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.72□□□□□ -1.65
PDE4D-220ENST00000512069 CNOT7Q9UIV1 285 aaKnown RBP4.72□□□□□ -1.65
PDE4D-220ENST00000512069 NUP155O75694 1391 aa4.72□□□□□ -1.65
PDE4D-220ENST00000512069 RGPD5Q99666 1765 aa4.71□□□□□ -1.66
PDE4D-220ENST00000512069 BRD4O60885 1362 aaPredicted RBP4.71□□□□□ -1.66
PDE4D-220ENST00000512069 PABPN1LA6NDY0 278 aaKnown RBP4.71□□□□□ -1.66
PDE4D-220ENST00000512069 PRSS44E7EML9 344 aa4.71□□□□□ -1.66
PDE4D-220ENST00000512069 SERPINI2O75830 405 aa4.71□□□□□ -1.66
PDE4D-220ENST00000512069 VNN2O95498 520 aa4.71□□□□□ -1.66
PDE4D-220ENST00000512069 SRD5A1P18405 259 aa4.71□□□□□ -1.66
PDE4D-220ENST00000512069 PGM1P36871 562 aa4.71□□□□□ -1.66
PDE4D-220ENST00000512069 BNC1Q01954 994 aa4.71□□□□□ -1.66
PDE4D-220ENST00000512069 TAF12Q16514 161 aa4.71□□□□□ -1.66
PDE4D-220ENST00000512069 PRAMEF19Q5SWL8 479 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms