RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 ARHGEF17Q96PE2 2063 aaPredicted RBP13.33□□□□□ -0.28
RNF4-215ENST00000511843 H3BM21 787 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 ZZEF1O43149 2961 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 HEXIM1O94992 359 aaKnown RBP13.32□□□□□ -0.28
RNF4-215ENST00000511843 JCHAINP01591 159 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 KRT10P13645 584 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 VIPR1P32241 457 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 CYLC1P35663 651 aaPredicted RBP13.32□□□□□ -0.28
RNF4-215ENST00000511843 SLC1A1P43005 524 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 YPEL5P62699 121 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 PPARDQ03181 441 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 AP1B1Q10567 949 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 NFATC4Q14934 902 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 AGERQ15109 404 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 SPA17Q15506 151 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 SMAD1Q15797 465 aaKnown RBP13.32□□□□□ -0.28
RNF4-215ENST00000511843 ALG11Q2TAA5 492 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 HES3Q5TGS1 186 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 LRRC38Q5VT99 294 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 KAZNQ674X7 775 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 ENPP7Q6UWV6 458 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 RAD9BQ6WBX8 426 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 CCDC170Q8IYT3 715 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 ARRDC2Q8TBH0 407 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 PIH1D2Q8WWB5 315 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 PDXPQ96GD0 296 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 ZNF830Q96NB3 372 aaPredicted RBP13.32□□□□□ -0.28
RNF4-215ENST00000511843 PANX2Q96RD6 677 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 LGR4Q9BXB1 951 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 CLPBQ9H078 707 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 SEPT10Q9P0V9 454 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 PHTF1Q9UMS5 762 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 CHKBQ9Y259 395 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 PCDHGA1Q9Y5H4 931 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 DUSP10Q9Y6W6 482 aa13.32□□□□□ -0.28
RNF4-215ENST00000511843 CACNA1BQ00975 2339 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 SCN8AQ9UQD0 1980 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 NEMP2A6NFY4 417 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 TMEM202A6NGA9 273 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 FZD6O60353 706 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 NDUFA10O95299 355 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 PECAM1P16284 738 aaPredicted RBP13.31□□□□□ -0.28
RNF4-215ENST00000511843 TSHRP16473 764 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 MX2P20592 715 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 ACP1P24666 158 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 HNF1BP35680 557 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 ETV3P41162 512 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 CDKN2BP42772 138 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 HADHBP55084 474 aaKnown RBP13.31□□□□□ -0.28
RNF4-215ENST00000511843 ADCY2Q08462 1091 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 PPIDQ08752 370 aaKnown RBP13.31□□□□□ -0.28
RNF4-215ENST00000511843 MTM1Q13496 603 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 CDKN3Q16667 212 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 HS1BP3Q53T59 392 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 ODF2Q5BJF6 829 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 RALGPS1Q5JS13 557 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 ALG1LQ6GMV1 187 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 SPOCD1Q6ZMY3 1216 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 Q6ZVL8 140 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 GALNT15Q8N3T1 639 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 CNTD1Q8N815 330 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 SPC24Q8NBT2 197 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 ACRBPQ8NEB7 543 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 LPCAT1Q8NF37 534 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 MDM1Q8TC05 714 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 OR1E3Q8WZA6 343 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 KRT35Q92764 455 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 FATE1Q969F0 183 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 NUS1Q96E22 293 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 MAK16Q9BXY0 300 aaKnown RBP13.31□□□□□ -0.28
RNF4-215ENST00000511843 SLC13A1Q9BZW2 595 aa13.31□□□□□ -0.28
RNF4-215ENST00000511843 SUDS3Q9H7L9 328 aaPredicted RBP13.31□□□□□ -0.28
RNF4-215ENST00000511843 MRPL40Q9NQ50 206 aaKnown RBP13.31□□□□□ -0.28
RNF4-215ENST00000511843 DDX56Q9NY93 547 aaKnown RBP13.31□□□□□ -0.28
RNF4-215ENST00000511843 CFAP69A5D8W1 941 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 GOLGA6CA6NDK9 693 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 GOLGA6BA6NDN3 693 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 ZNF487B1APH4 448 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 CASC3O15234 703 aaKnown RBP13.3□□□□□ -0.28
RNF4-215ENST00000511843 PRLP01236 227 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 MMP2P08253 660 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 GOLGA6DP0CG33 693 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 ALPPL2P10696 532 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 CYP2A6P11509 494 aaPredicted RBP13.3□□□□□ -0.28
RNF4-215ENST00000511843 CKMT1AP12532 417 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 FECHP22830 423 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 CD86P42081 329 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 PEX5P50542 639 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 HK3P52790 923 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 EPHB1P54762 984 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 SRP54P61011 504 aaKnown RBP13.3□□□□□ -0.28
RNF4-215ENST00000511843 INSM1Q01101 510 aaPredicted RBP13.3□□□□□ -0.28
RNF4-215ENST00000511843 CAMK2BQ13554 666 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 LRRC66Q68CR7 880 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 PNCKQ6P2M8 343 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 GUSBP11Q6P575 273 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 CRTC1Q6UUV9 634 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 USP45Q70EL2 814 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 KDF1Q8NAX2 398 aaPredicted RBP13.3□□□□□ -0.28
RNF4-215ENST00000511843 TPCN2Q8NHX9 752 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms