RNA–Protein interactions for RNA: ENST00000511669.1

CXCL3-204, Transcript of C-X-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CXCL3, Length 1,641 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-204ENST00000511669 NSL1Q96IY1 281 aa16.52■□□□□ 0.23
CXCL3-204ENST00000511669 SAMD11Q96NU1 681 aa16.52■□□□□ 0.23
CXCL3-204ENST00000511669 TMEM237Q96Q45 408 aa16.52■□□□□ 0.23
CXCL3-204ENST00000511669 TTC1Q99614 292 aa16.52■□□□□ 0.23
CXCL3-204ENST00000511669 LBHD1Q9BQE6 289 aaPredicted RBP16.52■□□□□ 0.23
CXCL3-204ENST00000511669 LRMDAQ9H2I8 198 aa16.52■□□□□ 0.23
CXCL3-204ENST00000511669 ABCB8Q9NUT2 735 aa16.52■□□□□ 0.23
CXCL3-204ENST00000511669 NCKIPSDQ9NZQ3 722 aa16.52■□□□□ 0.23
CXCL3-204ENST00000511669 CXXC1Q9P0U4 656 aaPredicted RBP16.52■□□□□ 0.23
CXCL3-204ENST00000511669 CPSF2Q9P2I0 782 aaKnown RBP16.52■□□□□ 0.23
CXCL3-204ENST00000511669 DNMT3BQ9UBC3 853 aaKnown RBP16.52■□□□□ 0.23
CXCL3-204ENST00000511669 XPR1Q9UBH6 696 aa16.52■□□□□ 0.23
CXCL3-204ENST00000511669 MARCOQ9UEW3 520 aaPredicted RBP16.52■□□□□ 0.23
CXCL3-204ENST00000511669 PCDHGC4Q9Y5F7 938 aa16.52■□□□□ 0.23
CXCL3-204ENST00000511669 ACTL7AQ9Y615 435 aa16.52■□□□□ 0.23
CXCL3-204ENST00000511669 C5orf67F2Z3F1 127 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 SOCS5O75159 536 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 STC1P52823 247 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 BCL2L1Q07817 233 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 PRKAA1Q13131 559 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 RCN2Q14257 317 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 ASRGL1Q7L266 308 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 PIWIL4Q7Z3Z4 852 aaKnown RBP16.51■□□□□ 0.23
CXCL3-204ENST00000511669 STK40Q8N2I9 435 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 ACVR1CQ8NER5 493 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 OR4K2Q8NGD2 314 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 OR13C4Q8NGS5 318 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 OR6Y1Q8NGX8 325 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 SPPL3Q8TCT6 385 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 SH3RF2Q8TEC5 729 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 NXNL1Q96CM4 212 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 ALG14Q96F25 216 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 MYO19Q96H55 970 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 SLC46A2Q9BY10 475 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 DRC3Q9H069 523 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 ATP13A3Q9H7F0 1226 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 SYTL2Q9HCH5 934 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 MAGEE1Q9HCI5 957 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 MAN1C1Q9NR34 630 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 ARHGEF3Q9NR81 526 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 VTI1BQ9UEU0 232 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 SLC25A13Q9UJS0 675 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.51■□□□□ 0.23
CXCL3-204ENST00000511669 RAP2CQ9Y3L5 183 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 KCTD3Q9Y597 815 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 COMMD10Q9Y6G5 202 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 ANKRD36A6QL64 1941 aa16.51■□□□□ 0.23
CXCL3-204ENST00000511669 TK2O00142 265 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 FCHO1O14526 889 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 GRM6O15303 877 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 NPHS1O60500 1241 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 GJB3O75712 270 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 CD160O95971 181 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 PYGLP06737 847 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 SERPINA6P08185 405 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 F7P08709 466 aaPredicted RBP16.5■□□□□ 0.23
CXCL3-204ENST00000511669 ALOX15P16050 662 aaPredicted RBP16.5■□□□□ 0.23
CXCL3-204ENST00000511669 TARSP26639 723 aaKnown RBP16.5■□□□□ 0.23
CXCL3-204ENST00000511669 PTPN4P29074 926 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 GLRBP48167 497 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 NUMBP49757 651 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 DNAJB13P59910 316 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 SNRPD1P62314 119 aaKnown RBP16.5■□□□□ 0.23
CXCL3-204ENST00000511669 SULT2A1Q06520 285 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 RAD51Q06609 339 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 PDAP1Q13442 181 aaKnown RBP16.5■□□□□ 0.23
CXCL3-204ENST00000511669 CSHL1Q14406 222 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 PLEKHG6Q3KR16 790 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 RBM20Q5T481 1227 aaKnown RBP16.5■□□□□ 0.23
CXCL3-204ENST00000511669 TPGS1Q6ZTW0 290 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 UBE2Q1Q7Z7E8 422 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 C7orf61Q8IZ16 206 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 ARHGAP24Q8N264 748 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 SLC22A17Q8WUG5 538 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 OTUB2Q96DC9 234 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 NDNQ99608 321 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 CDH19Q9H159 772 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 EML4Q9HC35 981 aaKnown RBP16.5■□□□□ 0.23
CXCL3-204ENST00000511669 KLC4Q9NSK0 619 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.5■□□□□ 0.23
CXCL3-204ENST00000511669 ZDHHC7Q9NXF8 308 aa16.5■□□□□ 0.23
CXCL3-204ENST00000511669 FCF1Q9Y324 198 aaKnown RBP16.5■□□□□ 0.23
CXCL3-204ENST00000511669 HIDE1A8MVS5 230 aa16.49■□□□□ 0.23
CXCL3-204ENST00000511669 SLC9A3R1O14745 358 aaPredicted RBP16.49■□□□□ 0.23
CXCL3-204ENST00000511669 ITM2AO43736 263 aa16.49■□□□□ 0.23
CXCL3-204ENST00000511669 LYPLA1O75608 230 aaPredicted RBP16.49■□□□□ 0.23
CXCL3-204ENST00000511669 RASSF9O75901 435 aa16.49■□□□□ 0.23
CXCL3-204ENST00000511669 PRLP01236 227 aa16.49■□□□□ 0.23
CXCL3-204ENST00000511669 POU2F2P09086 479 aa16.49■□□□□ 0.23
CXCL3-204ENST00000511669 PIRTP0C851 137 aa16.49■□□□□ 0.23
CXCL3-204ENST00000511669 CCDC166P0CW27 439 aa16.49■□□□□ 0.23
CXCL3-204ENST00000511669 ESRRAP11474 423 aaPredicted RBP16.49■□□□□ 0.23
CXCL3-204ENST00000511669 FDXRP22570 491 aa16.49■□□□□ 0.23
CXCL3-204ENST00000511669 SERPINA4P29622 427 aa16.49■□□□□ 0.23
CXCL3-204ENST00000511669 ZXDBP98169 803 aa16.49■□□□□ 0.23
CXCL3-204ENST00000511669 LMAN2Q12907 356 aa16.49■□□□□ 0.23
CXCL3-204ENST00000511669 TRAF2Q12933 501 aa16.49■□□□□ 0.23
CXCL3-204ENST00000511669 DMC1Q14565 340 aa16.49■□□□□ 0.23
CXCL3-204ENST00000511669 CYB5D1Q6P9G0 228 aa16.49■□□□□ 0.23
CXCL3-204ENST00000511669 RNF135Q8IUD6 432 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms