RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 MTA1Q13330 715 aa3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 COL28A1Q2UY09 1125 aa3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 ANXA2RQ3ZCQ2 193 aa3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 LRRC24Q50LG9 513 aa3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 KLHL22Q53GT1 634 aa3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 PRAMEF19Q5SWL8 479 aa3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 C19orf48Q6RUI8 117 aa3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 DHRS13Q6UX07 377 aa3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 TMEM57Q8N5G2 664 aa3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 NANOGP1Q8N7R0 232 aa3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 FSIP1Q8NA03 581 aa3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 ZFPM2Q8WW38 1151 aa3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 IGFBPL1Q8WX77 278 aa3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 ARRDC3Q96B67 414 aa3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 FAM84BQ96KN1 310 aaPredicted RBP3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 ZNF347Q96SE7 839 aa3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 RAD9AQ99638 391 aa3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 PYM1Q9BRP8 204 aaKnown RBP3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 THUMPD2Q9BTF0 503 aaKnown RBP3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 ABHD14AQ9BUJ0 271 aa3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 OSBPL5Q9H0X9 879 aaPredicted RBP3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 CHODLQ9H9P2 273 aa3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 PLEKHA2Q9HB19 425 aa3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 RASSF1Q9NS23 344 aa3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 KLHL13Q9P2N7 655 aa3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 DERAQ9Y315 318 aa3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.86□□□□□ -1.79
TOPBP1-208ENST00000511439 NBEAQ8NFP9 2946 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 SLC22A23A1A5C7 686 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 GRM8O00222 908 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 PI15O43692 258 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 USP12O75317 370 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 GJB5O95377 273 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 PRB1P04280 392 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 ASGR1P07306 291 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 ATP5F1P24539 256 aaPredicted RBP3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 MAPK9P45984 424 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 ADPRHP54922 357 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 RRP1P56182 461 aaKnown RBP3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 B4GALNT1Q00973 533 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 CDK18Q07002 472 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 HYAL1Q12794 435 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 TCP10Q12799 353 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 AIMP1Q12904 312 aaKnown RBP3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 GPM6BQ13491 265 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 EARS2Q5JPH6 523 aaKnown RBP3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 ZNF484Q5JVG2 852 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 ANO7Q6IWH7 933 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 SYNE3Q6ZMZ3 975 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 C15orf52Q6ZUT6 534 aaKnown RBP3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 RTL10Q7L3V2 364 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 ZDHHC17Q8IUH5 632 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 SAMD14Q8IZD0 417 aaPredicted RBP3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 PAQR4Q8N4S7 273 aaPredicted RBP3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 ENDOVQ8N8Q3 282 aaKnown RBP3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 OR52N4Q8NGI2 321 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 BCAS4Q8TDM0 211 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 SEZ6LQ9BYH1 1024 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 FTOQ9C0B1 505 aaKnown RBP eCLIP3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 EBF3Q9H4W6 596 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 RIC8AQ9NPQ8 531 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 SLC22A11Q9NSA0 550 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 RRN3Q9NYV6 651 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 GTF2A1LQ9UNN4 478 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 RABGAP1Q9Y3P9 1069 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 SPTA1P02549 2419 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 TENM4Q6N022 2769 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 FBN3Q75N90 2809 aa3.85□□□□□ -1.79
TOPBP1-208ENST00000511439 NPIPB13A6NJU9 1138 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 NPIPB5A8MRT5 1133 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 NPIPB4C9JG80 1138 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 MCIDASD6RGH6 385 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 NCAM2O15394 837 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 LRP3O75074 770 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 CD63P08962 238 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 CSF1P09603 554 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 ACP5P13686 325 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 RXRAP19793 462 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 SCP2P22307 547 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 PRPH2P23942 346 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 PNPLA4P41247 253 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 SLC12A2P55011 1212 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 GHRHRQ02643 423 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 TAF12Q16514 161 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 Q4G0T1 1027 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 CTXN3Q4LDR2 81 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 EPC2Q52LR7 807 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 LIPMQ5VYY2 423 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 MCM10Q7L590 875 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 MDGA2Q7Z553 956 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 CPOQ8IVL8 374 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 ARL14EPQ8N8R7 260 aaPredicted RBP3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 KLHDC9Q8NEP7 349 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 CEP70Q8NHQ1 597 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 C16orf52Q8NHV5 167 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 WIPF2Q8TF74 440 aaPredicted RBP3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 NSMCE1Q8WV22 266 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 WASF1Q92558 559 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 KAT2BQ92831 832 aa3.84□□□□□ -1.79
TOPBP1-208ENST00000511439 COQ8BQ96D53 544 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms