RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 DNAJC1Q96KC8 554 aaKnown RBP15.25■□□□□ 0.03
SCLT1-209ENST00000511426 MYADMQ96S97 322 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 HEPHQ9BQS7 1158 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 APOL5Q9BWW9 433 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 NSRP1Q9H0G5 558 aaKnown RBP15.25■□□□□ 0.03
SCLT1-209ENST00000511426 TNKS2Q9H2K2 1166 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 HPS4Q9NQG7 708 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 CLDND1Q9NY35 253 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 IL1RAPL1Q9NZN1 696 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 PLA2G4CQ9UP65 541 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 PLLPQ9Y342 182 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 ZNF711Q9Y462 761 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 SPO11Q9Y5K1 396 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 STX7O15400 261 aaKnown RBP15.24■□□□□ 0.03
SCLT1-209ENST00000511426 AHSGP02765 367 aa15.24■□□□□ 0.03
SCLT1-209ENST00000511426 CRABP2P29373 138 aa15.24■□□□□ 0.03
SCLT1-209ENST00000511426 ETV4P43268 484 aa15.24■□□□□ 0.03
SCLT1-209ENST00000511426 CSRP3P50461 194 aa15.24■□□□□ 0.03
SCLT1-209ENST00000511426 PDK4Q16654 411 aa15.24■□□□□ 0.03
SCLT1-209ENST00000511426 GAB4Q2WGN9 574 aa15.24■□□□□ 0.03
SCLT1-209ENST00000511426 TRIM42Q8IWZ5 723 aa15.24■□□□□ 0.03
SCLT1-209ENST00000511426 PIAS4Q8N2W9 510 aaPredicted RBP15.24■□□□□ 0.03
SCLT1-209ENST00000511426 TERB1Q8NA31 727 aa15.24■□□□□ 0.03
SCLT1-209ENST00000511426 MDGA1Q8NFP4 955 aa15.24■□□□□ 0.03
SCLT1-209ENST00000511426 OR2A12Q8NGT7 310 aa15.24■□□□□ 0.03
SCLT1-209ENST00000511426 SCRN2Q96FV2 425 aa15.24■□□□□ 0.03
SCLT1-209ENST00000511426 TSPAN17Q96FV3 270 aa15.24■□□□□ 0.03
SCLT1-209ENST00000511426 TBATAQ96M53 351 aa15.24■□□□□ 0.03
SCLT1-209ENST00000511426 MCCC1Q96RQ3 725 aaPredicted RBP15.24■□□□□ 0.03
SCLT1-209ENST00000511426 CIPCQ9C0C6 399 aa15.24■□□□□ 0.03
SCLT1-209ENST00000511426 SNX15Q9NRS6 342 aa15.24■□□□□ 0.03
SCLT1-209ENST00000511426 CATSPERZQ9NTU4 200 aa15.24■□□□□ 0.03
SCLT1-209ENST00000511426 DKK3Q9UBP4 350 aa15.24■□□□□ 0.03
SCLT1-209ENST00000511426 MID2Q9UJV3 735 aa15.24■□□□□ 0.03
SCLT1-209ENST00000511426 DENND4AQ7Z401 1863 aa15.23■□□□□ 0.03
SCLT1-209ENST00000511426 TSPAN11A1L157 253 aa15.23■□□□□ 0.03
SCLT1-209ENST00000511426 FOXO6A8MYZ6 492 aa15.23■□□□□ 0.03
SCLT1-209ENST00000511426 GOLGA8RI6L899 631 aa15.23■□□□□ 0.03
SCLT1-209ENST00000511426 NPC1O15118 1278 aa15.23■□□□□ 0.03
SCLT1-209ENST00000511426 PPARGP37231 505 aaPredicted RBP15.23■□□□□ 0.03
SCLT1-209ENST00000511426 ARSDP51689 593 aa15.23■□□□□ 0.03
SCLT1-209ENST00000511426 WDR4P57081 412 aaKnown RBP15.23■□□□□ 0.03
SCLT1-209ENST00000511426 ZKSCAN8Q15776 578 aaPredicted RBP15.23■□□□□ 0.03
SCLT1-209ENST00000511426 FASTKD1Q53R41 847 aaKnown RBP15.23■□□□□ 0.03
SCLT1-209ENST00000511426 TAF1BQ53T94 588 aaPredicted RBP15.23■□□□□ 0.03
SCLT1-209ENST00000511426 LVRNQ6Q4G3 990 aa15.23■□□□□ 0.03
SCLT1-209ENST00000511426 DPY19L3Q6ZPD9 716 aa15.23■□□□□ 0.03
SCLT1-209ENST00000511426 DENND6AQ8IWF6 608 aa15.23■□□□□ 0.03
SCLT1-209ENST00000511426 RAVER1Q8IY67 606 aaKnown RBP15.23■□□□□ 0.03
SCLT1-209ENST00000511426 CBARPQ8N350 705 aaPredicted RBP15.23■□□□□ 0.03
SCLT1-209ENST00000511426 PAF1Q8N7H5 531 aa15.23■□□□□ 0.03
SCLT1-209ENST00000511426 RAB3IL1Q8TBN0 382 aa15.23■□□□□ 0.03
SCLT1-209ENST00000511426 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.23■□□□□ 0.03
SCLT1-209ENST00000511426 ZNF317Q96PQ6 595 aaPredicted RBP15.23■□□□□ 0.03
SCLT1-209ENST00000511426 TRMT61BQ9BVS5 477 aaKnown RBP15.23■□□□□ 0.03
SCLT1-209ENST00000511426 GPR63Q9BZJ6 419 aa15.23■□□□□ 0.03
SCLT1-209ENST00000511426 ZFYVE1Q9HBF4 777 aa15.23■□□□□ 0.03
SCLT1-209ENST00000511426 PCMTD2Q9NV79 361 aa15.23■□□□□ 0.03
SCLT1-209ENST00000511426 IL17CQ9P0M4 197 aa15.23■□□□□ 0.03
SCLT1-209ENST00000511426 SLC17A6Q9P2U8 582 aa15.23■□□□□ 0.03
SCLT1-209ENST00000511426 SLCO3A1Q9UIG8 710 aa15.23■□□□□ 0.03
SCLT1-209ENST00000511426 APPL1Q9UKG1 709 aa15.23■□□□□ 0.03
SCLT1-209ENST00000511426 CCDC78A2IDD5 438 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 CD3EAPO15446 510 aaKnown RBP15.22■□□□□ 0.03
SCLT1-209ENST00000511426 PIGNO95427 931 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 GOT2P00505 430 aaKnown RBP15.22■□□□□ 0.03
SCLT1-209ENST00000511426 APOA4P06727 396 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 SLC8A1P32418 973 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 SLC26A3P40879 764 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 KPNA2P52292 529 aaKnown RBP15.22■□□□□ 0.03
SCLT1-209ENST00000511426 STC1P52823 247 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 PDE1CQ14123 709 aaPredicted RBP15.22■□□□□ 0.03
SCLT1-209ENST00000511426 PTPRNQ16849 979 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 CCDC153Q494R4 210 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 GDPD4Q6W3E5 623 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 CERS6Q6ZMG9 384 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 TPRG1Q6ZUI0 275 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 Q6ZVU0 165 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 PTAR1Q7Z6K3 402 aaPredicted RBP15.22■□□□□ 0.03
SCLT1-209ENST00000511426 TAX1BP1Q86VP1 789 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 C12orf40Q86WS4 652 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 MICALL1Q8N3F8 863 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 OR4K2Q8NGD2 314 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 OR13C4Q8NGS5 318 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 MGARPQ8TDB4 240 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 BCAS4Q8TDM0 211 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 SUSD6Q92537 303 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 TSNARE1Q96NA8 513 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 POPDC3Q9HBV1 291 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 TLK1Q9UKI8 766 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 MYLKQ15746 1914 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 FAM95CA0A1B0GW59 222 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 CCDC162PA2VCL2 907 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 GOLGA8TH3BQL2 631 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 BIRC5O15392 142 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 PRKCGP05129 697 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 STMN1P16949 149 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 ZNF30P17039 623 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 GABRB3P28472 473 aa15.22■□□□□ 0.03
SCLT1-209ENST00000511426 LTBRP36941 435 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms