RNA–Protein interactions for RNA: ENST00000509014.2

CALCOCO2-212, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-212ENST00000509014 SMG1Q96Q15 3661 aaKnown RBP5.51□□□□□ -1.53
CALCOCO2-212ENST00000509014 APC2O95996 2303 aa5.51□□□□□ -1.53
CALCOCO2-212ENST00000509014 PLXND1Q9Y4D7 1925 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 CD3EAPO15446 510 aaKnown RBP5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 TSPAN1O60635 241 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 MOSPD3O75425 235 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 PSMD10O75832 226 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 NXPH3O95157 252 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 RASAL1O95294 804 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 PTPN2P17706 415 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 PSMC3P17980 439 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 TNFSF4P23510 183 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 ITPKBP27987 946 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 SFNP31947 248 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 OR1D2P34982 312 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 CCR2P41597 374 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 JAK3P52333 1124 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 BCAT1P54687 386 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 KCNAB1Q14722 419 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 NAB2Q15742 525 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 FAM171A1Q5VUB5 890 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 RRAGBQ5VZM2 374 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 PLA2G4FQ68DD2 849 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 SLC9A4Q6AI14 798 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 CASC1Q6TDU7 716 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 RNF44Q7L0R7 432 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 ZNF551Q7Z340 670 aaPredicted RBP5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 CACNA2D4Q7Z3S7 1137 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 CHD1LQ86WJ1 897 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 CEP57Q86XR8 500 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 SMC5Q8IY18 1101 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 IZUMO1Q8IYV9 350 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 SPARTQ8N0X7 666 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 CCDC33Q8N5R6 958 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 ZNF713Q8N859 430 aaPredicted RBP5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 HASPINQ8TF76 798 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 PRPF31Q8WWY3 499 aaKnown RBP5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 TMEM143Q96AN5 459 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 R3HDM4Q96D70 268 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 RSPRY1Q96DX4 576 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 SLC39A13Q96H72 371 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 CPB2Q96IY4 423 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 BBC3Q96PG8 261 aaPredicted RBP5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 RIT2Q99578 217 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 APOL6Q9BWW8 343 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 LRRC2Q9BYS8 371 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 CXCL16Q9H2A7 254 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 NXF3Q9H4D5 531 aaKnown RBP5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 ZFP14Q9HCL3 533 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 VPS45Q9NRW7 570 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 TBC1D23Q9NUY8 699 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 MYO1AQ9UBC5 1043 aa5.5□□□□□ -1.53
CALCOCO2-212ENST00000509014 SF3B1O75533 1304 aaKnown RBP eCLIP5.49□□□□□ -1.535e-6■■■■□ 19.4
CALCOCO2-212ENST00000509014 HELZP42694 1942 aaKnown RBP5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 ESYT2A0FGR8 921 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 ARHGEF37A1IGU5 675 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 CLCA1A8K7I4 914 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 ZNF263O14978 683 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 EXTL3O43909 919 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 RPP40O75818 363 aaKnown RBP5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 PIAS2O75928 621 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 HGFP14210 728 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 TPH1P17752 444 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 CSRP1P21291 193 aaKnown RBP5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 CHMLP26374 656 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 UQCRC1P31930 480 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 MCM5P33992 734 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 PTH2RP49190 550 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 CACNA2D1P54289 1103 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 TIAL1Q01085 375 aaKnown RBP eCLIP5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 NUCB1Q02818 461 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 LAMTOR4Q0VGL1 99 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 GRIK3Q13003 919 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 PMS2P11Q13670 270 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 CCNIQ14094 377 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 PLK5Q496M5 336 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 SYCP2LQ5T4T6 812 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 LRCH2Q5VUJ6 765 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 HIBCHQ6NVY1 386 aaPredicted RBP5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 C19orf48Q6RUI8 117 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 CD300LGQ6UXG3 332 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 RTL10Q7L3V2 364 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 MIER3Q7Z3K6 550 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 MFSD6LQ8IWD5 586 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 SDR16C5Q8N3Y7 309 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 OR2C3Q8N628 320 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 FAM98AQ8NCA5 519 aaKnown RBP5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 RDM1Q8NG50 284 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 IPCEF1Q8WWN9 437 aaPredicted RBP5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 SMARCD2Q92925 531 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 CCDC51Q96ER9 411 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 EDEM2Q9BV94 578 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 TEKT3Q9BXF9 490 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 ZMYND12Q9H0C1 365 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 GLT8D2Q9H1C3 349 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 DHX33Q9H6R0 707 aaKnown RBP5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 TRPV4Q9HBA0 871 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 MTRRQ9UBK8 725 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 TLK1Q9UKI8 766 aa5.49□□□□□ -1.53
CALCOCO2-212ENST00000509014 KLK13Q9UKR3 277 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms