RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 PCBP3P57721 371 aaKnown RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 RGS8P57771 180 aaPredicted RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 VBP1P61758 197 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 TGFB2P61812 414 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 CSNK2A1P68400 391 aaPredicted RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 PHEXP78562 749 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 CSTF3Q12996 717 aaKnown RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 RANBP10Q6VN20 620 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 PTF1AQ7RTS3 328 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 ARMC10Q8N2F6 343 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 GMCL1P1Q8NEA9 526 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 FAM46DQ8NEK8 389 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 CSNK2A3Q8NEV1 391 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 OR14C36Q8NHC7 312 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 CYB5D2Q8WUJ1 264 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 TRIB2Q92519 343 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 CCDC124Q96CT7 223 aaKnown RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 KLHL15Q96M94 604 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 BBS2Q9BXC9 721 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 MFFQ9GZY8 342 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 BTBD1Q9H0C5 482 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 GLT8D2Q9H1C3 349 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 MGAT4CQ9UBM8 478 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 CLCA3PQ9Y6N3 262 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 TCHHQ07283 1943 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 ZNF189O75820 626 aaPredicted RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 NFATC1O95644 943 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 ENO2P09104 434 aaPredicted RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 UROSP10746 265 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 SRCP12931 536 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 IFNGR1P15260 489 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 IFNAR1P17181 557 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 CCNOP22674 350 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 PCK1P35558 622 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 ABCG1P45844 678 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 FNTBP49356 437 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 GATMP50440 423 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 ARSFP54793 590 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 SLC12A3P55017 1021 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 TFAP4Q01664 338 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 DSG1Q02413 1049 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 LRFN4Q6PJG9 635 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 ZNF813Q6ZN06 617 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 PLEKHH3Q7Z736 793 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 WFDC8Q8IUA0 241 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 TMTC1Q8IUR5 882 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 PCDH19Q8TAB3 1148 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 DNAJA4Q8WW22 397 aaPredicted RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 CAPSLQ8WWF8 208 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 SLC13A3Q8WWT9 602 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 THAP4Q8WY91 577 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 PWWP2AQ96N64 755 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 LRRC1Q9BTT6 524 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 HRH4Q9H3N8 390 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 CRLF2Q9HC73 371 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 STX18Q9P2W9 335 aaKnown RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 PCDHGA5Q9Y5G8 931 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 KLF18A0A0U1RQI7 1052 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 C1orf232A0A0U1RR37 186 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 A0A1B0GTH6 734 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 FAM237AA0A1B0GTK4 181 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 C13orf42A0A1B0GVH6 325 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 ZNF879B4DU55 563 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 NPIPA5E9PKD4 350 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 NPIPA3F8WFD2 350 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 MATN2O00339 956 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 KIAA0355O15063 1070 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 CSTAP01040 98 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 KRT1P04264 644 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 BPIP17213 487 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 CEBPBP17676 345 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 KLRK1P26718 216 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 ANXA13P27216 316 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 YWHABP31946 246 aaKnown RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 S100A5P33763 92 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 RFX3P48380 749 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 PTDSS1P48651 473 aaKnown RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 MECP2P51608 486 aaKnown RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 UFM1P61960 85 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 ALKBH1Q13686 389 aaKnown RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 HNF4GQ14541 408 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 MORF4L2Q15014 288 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 PDK4Q16654 411 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 MYLK3Q32MK0 819 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 FAM26DQ5JW98 314 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 MAMDC4Q6UXC1 1216 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 CENPSQ8N2Z9 138 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 ATAD1Q8NBU5 361 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 OR13H1Q8NG92 308 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 OR10H5Q8NGA6 315 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 ZNF596Q8TC21 504 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 HEXDCQ8WVB3 486 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 SEMA4DQ92854 862 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 KATNB1Q9BVA0 655 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 JPH1Q9HDC5 661 aaPredicted RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 TLR8Q9NR97 1041 aaKnown RBP3.94□□□□□ -1.78
NEDD4-209ENST00000508871 TM7SF3Q9NS93 570 aa3.94□□□□□ -1.78
NEDD4-209ENST00000508871 TAS2R3Q9NYW6 316 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms