RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 JAK1P23458 1154 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 MGAT1P26572 445 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 ECHS1P30084 290 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 CCR1P32246 355 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 GPD2P43304 727 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 PMS2P54278 862 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 PDE1AP54750 535 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 MFAP4P55083 255 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 EIF3BP55884 814 aaKnown RBP4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 CTXN1P60606 82 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 OLR1P78380 273 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 TEFQ10587 303 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 GPM6BQ13491 265 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 CBFBQ13951 182 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 FAM187BQ17R55 369 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 C15orf59Q2T9L4 293 aaPredicted RBP4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 AARDQ4LEZ3 155 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 CDC73Q6P1J9 531 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 KCTD9Q7L273 389 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 PARS2Q7L3T8 475 aaKnown RBP4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 KCTD20Q7Z5Y7 419 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 TAF8Q7Z7C8 310 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 CAND1Q86VP6 1230 aaKnown RBP4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 RHPN2Q8IUC4 686 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 MYOCDQ8IZQ8 938 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 ZCCHC7Q8N3Z6 543 aaKnown RBP4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 MINDY1Q8N5J2 469 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 ZNF366Q8N895 744 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 RNF169Q8NCN4 708 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 RBM15BQ8NDT2 890 aaKnown RBP4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 GANCQ8TET4 914 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 RAPGEF5Q92565 580 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 TFAP2CQ92754 450 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 GRAMD1AQ96CP6 724 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 PPP1R10Q96QC0 940 aaKnown RBP4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 KCNK16Q96T55 309 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 GAD1Q99259 594 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 ADAM2Q99965 735 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 RHOXF2Q9BQY4 288 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 THUMPD2Q9BTF0 503 aaKnown RBP4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 SLC25A23Q9BV35 468 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 GLIS2Q9BZE0 524 aaPredicted RBP4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 TMEM206Q9H813 350 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 GORASP2Q9H8Y8 452 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 UNKLQ9H9P5 680 aaKnown RBP4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 PALMDQ9NP74 551 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 IARS2Q9NSE4 1012 aaKnown RBP4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 P4HTMQ9NXG6 502 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 FBXL17Q9UF56 701 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 RCOR1Q9UKL0 485 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 PSME2Q9UL46 239 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 CDH7Q9ULB5 785 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 MTUS1Q9ULD2 1270 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 MTMR6Q9Y217 621 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 ATP11BQ9Y2G3 1177 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 LIPGQ9Y5X9 500 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 CAPN7Q9Y6W3 813 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 SALL3Q9BXA9 1300 aa4.38□□□□□ -1.71
SMARCA5-202ENST00000508573 GOLGA6L10A0A0M3HER8 536 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 TCRBV21S2A2A0A5A6 115 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 NCF1BA6NI72 391 aaPredicted RBP4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 ZSCAN5BA6NJL1 495 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 NCF1CA8MVU1 366 aaPredicted RBP4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 CDRT15L2A8MXV6 281 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 KCNJ18B7U540 433 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 TEX22C9J3V5 150 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 FAM86B1E9PN63 330 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 H0YIN7 160 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 TO15178 435 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 SEPT4O43236 478 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 PRAMEF4O60810 478 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 ZNF254O75437 659 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 HEXIM1O94992 359 aaKnown RBP4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 IPO7O95373 1038 aaKnown RBP4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 C1RP00736 705 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 NPPAP01160 153 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 GRPP07492 148 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 TPM1P09493 284 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 LTA4HP09960 611 aaKnown RBP4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 UROSP10746 265 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 SRCP12931 536 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 KRT5P13647 590 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 COX7A2P14406 83 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 TRIM21P19474 475 aaKnown RBP4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 GLRA2P23416 452 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 AHCYP23526 432 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 CHRNA3P32297 505 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 PTGER3P43115 390 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 KCNJ1P48048 391 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 CCR3P51677 355 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 CLCNKAP51800 687 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 HADHBP55084 474 aaKnown RBP4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 TIRAPP58753 221 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 POU6F2P78424 691 aaPredicted RBP4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 MXRA7P84157 204 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 PLD1Q13393 1074 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 MTM1Q13496 603 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 GRAPQ13588 217 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 KCNJ12Q14500 433 aa4.37□□□□□ -1.71
SMARCA5-202ENST00000508573 EFTUD2Q15029 972 aaKnown RBP eCLIP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms