RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 C10orf120Q5SQS8 335 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 EMC10Q5UCC4 262 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 ESRP1Q6NXG1 681 aaKnown RBP4.74□□□□□ -1.65
NUP54-206ENST00000508465 DENND1BQ6P3S1 775 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 RHBDF2Q6PJF5 856 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 TMEM270Q6UE05 265 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 CLEC17AQ6ZS10 378 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 Q6ZS52 159 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 CLEC20AQ6ZU45 233 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 ASCL5Q7RTU5 278 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 TTC30AQ86WT1 665 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 RALGPS2Q86X27 583 aaPredicted RBP4.74□□□□□ -1.65
NUP54-206ENST00000508465 TMEM25Q86YD3 366 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 MLKLQ8NB16 471 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 ANKRD52Q8NB46 1076 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 OR10H5Q8NGA6 315 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 DNASE1L2Q92874 299 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 ERLEC1Q96DZ1 483 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 CNOT6LQ96LI5 555 aaKnown RBP4.74□□□□□ -1.65
NUP54-206ENST00000508465 NT5C1BQ96P26 610 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 SLITRK1Q96PX8 696 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 ZSWIM1Q9BR11 485 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 NACA2Q9H009 215 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 NUP62CLQ9H1M0 184 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 C8orf33Q9H7E9 229 aaPredicted RBP4.74□□□□□ -1.65
NUP54-206ENST00000508465 ECT2Q9H8V3 914 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 ACP6Q9NPH0 428 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 TRPV5Q9NQA5 729 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 SAMSN1Q9NSI8 373 aaKnown RBP4.74□□□□□ -1.65
NUP54-206ENST00000508465 OBP2AQ9NY56 170 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 IL37Q9NZH6 218 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 EHD2Q9NZN4 543 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 AJAP1Q9UKB5 411 aaPredicted RBP4.74□□□□□ -1.65
NUP54-206ENST00000508465 ARHGAP26Q9UNA1 814 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 SCML2Q9UQR0 700 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 MRPS17Q9Y2R5 130 aaKnown RBP4.74□□□□□ -1.65
NUP54-206ENST00000508465 F5P12259 2224 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 CACNA1IQ9P0X4 2223 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 B5MCH6 92 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 TRDMT1O14717 391 aaKnown RBP4.73□□□□□ -1.65
NUP54-206ENST00000508465 NCAM2O15394 837 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 TLR5O60602 858 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 SPDEFO95238 335 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 GNA14O95837 355 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 KLKB1P03952 638 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 ZDHHC11BP0C7U3 371 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 PNMA6AP0CW24 399 aaPredicted RBP4.73□□□□□ -1.65
NUP54-206ENST00000508465 ITGAMP11215 1152 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 VDRP11473 427 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 RARGP13631 454 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 CD40P25942 277 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 PON1P27169 355 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 ATP5C1P36542 298 aaKnown RBP4.73□□□□□ -1.65
NUP54-206ENST00000508465 CXCL12P48061 93 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 PPP3CCP48454 512 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 TKTL1P51854 596 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 NRG3P56975 720 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 SATB1Q01826 763 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 CETN1Q12798 172 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 GRSF1Q12849 480 aaKnown RBP eCLIP4.73□□□□□ -1.65
NUP54-206ENST00000508465 SRSF5Q13243 272 aaKnown RBP4.73□□□□□ -1.65
NUP54-206ENST00000508465 PDGFRLQ15198 375 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 DHCR24Q15392 516 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 LPAL2Q16609 132 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 C2orf27AQ580R0 203 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 PIK3R6Q5UE93 754 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 SNX30Q5VWJ9 437 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 PIGZQ86VD9 579 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 BBS7Q8IWZ6 715 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 CPA6Q8N4T0 437 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 CCDC33Q8N5R6 958 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 UBR7Q8N806 425 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 TRIML1Q8N9V2 468 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 CLEC4CQ8WTT0 213 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 OSCP1Q8WVF1 389 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 ATP2A3Q93084 1043 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 CEP295NLQ96MC4 621 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 P2RY13Q9BPV8 354 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 TEX101Q9BY14 249 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 SLC29A3Q9BZD2 475 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 ULBP1Q9BZM6 244 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 DNAI2Q9GZS0 605 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 MIS12Q9H081 205 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 VPS16Q9H269 839 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 FBXO44Q9H4M3 255 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 ZDHHC4Q9NPG8 344 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 TLR8Q9NR97 1041 aaKnown RBP4.73□□□□□ -1.65
NUP54-206ENST00000508465 COMMD8Q9NX08 183 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 TSPAN16Q9UKR8 245 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 KIAA1257Q9ULG3 409 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 USP18Q9UMW8 372 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 KMT2EQ8IZD2 1858 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 ZNF638Q14966 1978 aaKnown RBP4.73□□□□□ -1.65
NUP54-206ENST00000508465 ATG2BQ96BY7 2078 aa4.73□□□□□ -1.65
NUP54-206ENST00000508465 GREB1Q4ZG55 1949 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 TICRRQ7Z2Z1 1910 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 E2F8A0AVK6 867 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 FAM92AA1XBS5 289 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 YJEFN3A6XGL0 299 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 KCNJ18B7U540 433 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms