RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 NANOS2P60321 138 aaKnown RBP4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 DCAF7P61962 342 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 SETQ01105 290 aaPredicted RBP4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 OLIG2Q13516 323 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 NAE1Q13564 534 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 PLCB4Q15147 1175 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 DPCR1Q3MIW9 517 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 CXorf66Q5JRM2 361 aaPredicted RBP4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 SNX30Q5VWJ9 437 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 TTI2Q6NXR4 508 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 KLHL24Q6TFL4 600 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 ZC3HC1Q86WB0 502 aaKnown RBP4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 CCDC13Q8IYE1 715 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 SAMD14Q8IZD0 417 aaPredicted RBP4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 IQCF1Q8N6M8 205 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 PDILTQ8N807 584 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 NEUROG1Q92886 237 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 FAM149B1Q96BN6 582 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 MMABQ96EY8 250 aaPredicted RBP4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 SLC41A2Q96JW4 573 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 ZPBPQ9BS86 351 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 WACQ9BTA9 647 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 STRA6Q9BX79 667 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 C1QTNF5Q9BXJ0 243 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 KCNN2Q9H2S1 579 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 ESRP2Q9H6T0 727 aaKnown RBP4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 POLR1BQ9H9Y6 1135 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 KRT84Q9NSB2 600 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 CDC14AQ9UNH5 594 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 STON1Q9Y6Q2 735 aa4.12□□□□□ -1.75
TOPBP1-204ENST00000505804 TRIP12Q14669 1992 aaPredicted RBP4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 A0A1W2PQF6 199 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 hDV102S1A0JD36 115 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 LINC01553A4QN01 128 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 HNRNPCL1O60812 293 aaKnown RBP4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 KCNJ13O60928 360 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 NKX2-2O95096 273 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 CCNDBP1O95273 360 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 MLYCDO95822 493 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 EIF2S1P05198 315 aaKnown RBP4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 PRSS2P07478 247 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 NGFRP08138 427 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 RARGP13631 454 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 CD58P19256 250 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 F2RL1P55085 397 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 BNC1Q01954 994 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 MAMLD1Q13495 774 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 MAPRE1Q15691 268 aaKnown RBP4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 EFNB3Q15768 340 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 SLC45A4Q5BKX6 768 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 GLCCI1Q86VQ1 547 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 ZDHHC17Q8IUH5 632 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 WDR63Q8IWG1 891 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 ADSSL1Q8N142 457 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 CLIP4Q8N3C7 705 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 FRMD1Q8N878 549 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 WASF1Q92558 559 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 RND1Q92730 232 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 ARHGEF2Q92974 986 aaKnown RBP4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 ZNF479Q96JC4 524 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 FAM110AQ9BQ89 295 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 CHCHD6Q9BRQ6 235 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 ITPAQ9BY32 194 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 NDST4Q9H3R1 872 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 EHD2Q9NZN4 543 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 DLGAP2Q9P1A6 1054 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 ABI3Q9P2A4 366 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 SLC9A2Q9UBY0 812 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 SLCO3A1Q9UIG8 710 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 CORO1CQ9ULV4 474 aaPredicted RBP4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 ERVK-11Q9UQG0 969 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 ADAM18Q9Y3Q7 739 aa4.11□□□□□ -1.75
TOPBP1-204ENST00000505804 IGLV5-52A0A0A0MRZ9 124 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 A0A1W2PRG0 241 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 CLEC18AA5D8T8 446 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 FAM90A8PA6NJQ4 464 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 AKR1B15C9JRZ8 316 aaPredicted RBP4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 WNT9BO14905 357 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 SMAD6O43541 496 aaKnown RBP4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 DDX58O95786 925 aaKnown RBP4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 FAM90A13PP0C7W8 464 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 FAM90A24PP0C7X0 464 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 LAMP2P13473 410 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 ZNF12P17014 697 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 ZNF182P17025 639 aaPredicted RBP4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 SSTR2P30874 369 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 STX2P32856 288 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 ARL3P36405 182 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 THBS3P49746 956 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 METAP2P50579 478 aaKnown RBP eCLIP4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 LTBQ06643 244 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 GOLGA8DPQ0D2H9 430 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 TRAF2Q12933 501 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 CSTF3Q12996 717 aaKnown RBP4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 EIF4A2Q14240 407 aaKnown RBP4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 RALBP1Q15311 655 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 EIF2S3LQ2VIR3 472 aaKnown RBP4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 USP41Q3LFD5 358 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 C8orf82Q6P1X6 216 aaPredicted RBP4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 DLK2Q6UY11 383 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms