RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 CXCR3P49682 368 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 PMS2P54278 862 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 KIAA1024LP59773 190 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 FKBP3Q00688 224 aaKnown RBP6.05□□□□□ -1.44
GYPB-204ENST00000504951 GCNT1Q02742 428 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 ELP6Q0PNE2 266 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 CBLBQ13191 982 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 QPCTQ16769 361 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 WSCD2Q2TBF2 565 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 DEFB109BQ30KR1 87 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 COBLL1Q53SF7 1204 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 PHF19Q5T6S3 580 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 DENND1BQ6P3S1 775 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 WDR74Q6RFH5 385 aaPredicted RBP6.05□□□□□ -1.44
GYPB-204ENST00000504951 CEACAM20Q6UY09 585 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 ARHGAP22Q7Z5H3 698 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 VWA5B2Q8N398 1253 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 PPM1KQ8N3J5 372 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 Q8N9G6 341 aaPredicted RBP6.05□□□□□ -1.44
GYPB-204ENST00000504951 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.05□□□□□ -1.44
GYPB-204ENST00000504951 FAM46DQ8NEK8 389 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 ZNF397Q8NF99 534 aaPredicted RBP6.05□□□□□ -1.44
GYPB-204ENST00000504951 GRIN3AQ8TCU5 1115 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 CASKIN2Q8WXE0 1202 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 STARD8Q92502 1023 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 SEC14L1Q92503 715 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 TSACCQ96A04 125 aaPredicted RBP6.05□□□□□ -1.44
GYPB-204ENST00000504951 FAM149B1Q96BN6 582 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 NT5C1BQ96P26 610 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 SYNDIG1Q9H7V2 258 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 TRNAU1APQ9NX07 287 aaKnown RBP6.05□□□□□ -1.44
GYPB-204ENST00000504951 KCTD5Q9NXV2 234 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 SLC39A1Q9NY26 324 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 SIRPGQ9P1W8 387 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 HECAQ9UBI9 543 aaPredicted RBP6.05□□□□□ -1.44
GYPB-204ENST00000504951 PPARGC1AQ9UBK2 798 aaKnown RBP6.05□□□□□ -1.44
GYPB-204ENST00000504951 VANGL2Q9ULK5 521 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 ENTPD4Q9Y227 616 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 POLHQ9Y253 713 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 ARHGEF17Q96PE2 2063 aaPredicted RBP6.05□□□□□ -1.44
GYPB-204ENST00000504951 APCP25054 2843 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 A0A0D9SEW6 157 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 TSPAN11A1L157 253 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 E5RJQ4 531 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 PDE2AO00408 941 aaPredicted RBP6.04□□□□□ -1.44
GYPB-204ENST00000504951 P4HA2O15460 535 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 BNIP3LO60238 219 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 MMP20O60882 483 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 HSF2BPO75031 334 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 PAGE1O75459 146 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 RFPL1O75677 317 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 F9P00740 461 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 FGF1P05230 155 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 RHOCP08134 193 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 GRNP28799 593 aaKnown RBP6.04□□□□□ -1.44
GYPB-204ENST00000504951 STAT5AP42229 794 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 NDST2P52849 883 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 SNRPD1P62314 119 aaKnown RBP6.04□□□□□ -1.44
GYPB-204ENST00000504951 ARF5P84085 180 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 NRG1Q02297 640 aaPredicted RBP6.04□□□□□ -1.44
GYPB-204ENST00000504951 APBA1Q02410 837 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 SRSF11Q05519 484 aaKnown RBP6.04□□□□□ -1.44
GYPB-204ENST00000504951 LRRC63Q05C16 580 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 GRM3Q14832 879 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 IRF4Q15306 451 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 KLHL40Q2TBA0 621 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 MYLK3Q32MK0 819 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 ALFQ53S48 1182 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 SPECC1LQ69YQ0 1117 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 TTI2Q6NXR4 508 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 ENPP7Q6UWV6 458 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 LRRC31Q6UY01 552 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 LYSMD3Q7Z3D4 306 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 TAF8Q7Z7C8 310 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 TTC7BQ86TV6 843 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 VPS36Q86VN1 386 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 ESX1Q8N693 406 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 OR2AP1Q8NGE2 309 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 OR56A4Q8NGH8 313 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 CXorf40AQ8TE69 158 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 ARHGEF2Q92974 986 aaKnown RBP6.04□□□□□ -1.44
GYPB-204ENST00000504951 ART4Q93070 314 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 CCDC74BQ96LY2 380 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 GSDMAQ96QA5 445 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 TSG101Q99816 390 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 NUDT22Q9BRQ3 303 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 SLC29A3Q9BZD2 475 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 SCAND2PQ9GZW5 306 aaPredicted RBP6.04□□□□□ -1.44
GYPB-204ENST00000504951 TNKS2Q9H2K2 1166 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 RUBCNLQ9H714 662 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 METTL14Q9HCE5 456 aaKnown RBP6.04□□□□□ -1.44
GYPB-204ENST00000504951 ST7Q9NRC1 585 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 DDIT4Q9NX09 232 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 KLQ9UEF7 1012 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 GGT7Q9UJ14 662 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 KCND3Q9UK17 655 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 TLK1Q9UKI8 766 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 MAN1B1Q9UKM7 699 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 SLC5A6Q9Y289 635 aa6.04□□□□□ -1.44
GYPB-204ENST00000504951 CHD5Q8TDI0 1954 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms