RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 SOX17Q9H6I2 414 aaPredicted RBP17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 LRRC4Q9HBW1 653 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 PTPRHQ9HD43 1115 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 RCOR3Q9P2K3 495 aaPredicted RBP17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 IGKV6D-21A0A0A0MT36 114 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 TK2O00142 265 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 PRKCBP05771 671 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 GSNP06396 782 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 SNRPB2P08579 225 aaKnown RBP17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 KRT19P08727 400 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 CLK3P49761 638 aaKnown RBP17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 MAPK11Q15759 364 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 HIST2H2ACQ16777 129 aaPredicted RBP17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 ANO4Q32M45 955 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 HSDL1Q3SXM5 330 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 PAGE2BQ5JRK9 111 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 CCDC81Q6ZN84 652 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 PIGZQ86VD9 579 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 C1orf127Q8N9H9 656 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 TRPV3Q8NET8 790 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 GABPB2Q8TAK5 448 aaPredicted RBP17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 RASSF5Q8WWW0 418 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 MUL1Q969V5 352 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 TSNARE1Q96NA8 513 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 SNX18Q96RF0 628 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 KCTD15Q96SI1 283 aaPredicted RBP17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 GPR22Q99680 433 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 TASP1Q9H6P5 420 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 CAB39LQ9H9S4 337 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 ACSS2Q9NR19 701 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 RNF146Q9NTX7 359 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 EIF3LQ9Y262 564 aaKnown RBP17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 HES2Q9Y543 173 aa17.9■□□□□ 0.46
POLR2J3-209ENST00000504157 ICMTO60725 284 aa17.89■□□□□ 0.45
POLR2J3-209ENST00000504157 MAFO75444 373 aaPredicted RBP17.89■□□□□ 0.45
POLR2J3-209ENST00000504157 CRHBPP24387 322 aa17.89■□□□□ 0.45
POLR2J3-209ENST00000504157 TUBA1BP68363 451 aa17.89■□□□□ 0.45
POLR2J3-209ENST00000504157 FASTKQ14296 549 aaKnown RBP17.89■□□□□ 0.45
POLR2J3-209ENST00000504157 POLD3Q15054 466 aaPredicted RBP17.89■□□□□ 0.45
POLR2J3-209ENST00000504157 CARTPTQ16568 116 aa17.89■□□□□ 0.45
POLR2J3-209ENST00000504157 CES3Q6UWW8 571 aa17.89■□□□□ 0.45
POLR2J3-209ENST00000504157 TUBA1AQ71U36 451 aa17.89■□□□□ 0.45
POLR2J3-209ENST00000504157 ZDHHC17Q8IUH5 632 aa17.89■□□□□ 0.45
POLR2J3-209ENST00000504157 ADGRG5Q8IZF4 528 aa17.89■□□□□ 0.45
POLR2J3-209ENST00000504157 ASCC1Q8N9N2 400 aaKnown RBP17.89■□□□□ 0.45
POLR2J3-209ENST00000504157 ZNF669Q96BR6 464 aaPredicted RBP17.89■□□□□ 0.45
POLR2J3-209ENST00000504157 SLC25A23Q9BV35 468 aa17.89■□□□□ 0.45
POLR2J3-209ENST00000504157 PIH1D1Q9NWS0 290 aaKnown RBP17.89■□□□□ 0.45
POLR2J3-209ENST00000504157 GMPR2Q9P2T1 348 aaKnown RBP17.89■□□□□ 0.45
POLR2J3-209ENST00000504157 ZNF639Q9UID6 485 aa17.89■□□□□ 0.45
POLR2J3-209ENST00000504157 TSPAN16Q9UKR8 245 aa17.89■□□□□ 0.45
POLR2J3-209ENST00000504157 CLRN2A0PK11 232 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 NRP2O60462 931 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 TPST1O60507 370 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 KRT6AP02538 564 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 KRT6BP04259 564 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 HDCP19113 662 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 PSMB4P28070 264 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 CD40LGP29965 261 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 PPP5CP53041 499 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 AGKQ53H12 422 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 UBE2UQ5VVX9 321 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 LCN8Q6JVE9 175 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 MAGEE2Q8TD90 523 aaPredicted RBP17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 PHF10Q8WUB8 498 aaKnown RBP17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 ATXN7L3BQ96GX2 97 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 VPS39Q96JC1 886 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 MUS81Q96NY9 551 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 AGAP2Q99490 1192 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 TTC24A2A3L6 582 aaPredicted RBP17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 CCDC78A2IDD5 438 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 H0Y858 1186 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 KCNK2O95069 426 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 ITIH1P19827 911 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 LRPAP1P30533 357 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 SERPINB10P48595 397 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 P2RX3P56373 397 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 LAMC2Q13753 1193 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 DGUOKQ16854 277 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 BSPRYQ5W0U4 402 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 SPPL2CQ8IUH8 684 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 ZBTB8OSQ8IWT0 167 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 ATL1Q8WXF7 558 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 P2RY11Q96G91 374 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 TLR9Q9NR96 1032 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 INTS10Q9NVR2 710 aaKnown RBP17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 NSMCE4AQ9NXX6 385 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 TLK1Q9UKI8 766 aa17.88■□□□□ 0.45
POLR2J3-209ENST00000504157 C16orf96A6NNT2 1141 aa17.87■□□□□ 0.45
POLR2J3-209ENST00000504157 TAF4O00268 1085 aa17.87■□□□□ 0.45
POLR2J3-209ENST00000504157 TEX28O15482 410 aa17.87■□□□□ 0.45
POLR2J3-209ENST00000504157 GPC4O75487 556 aa17.87■□□□□ 0.45
POLR2J3-209ENST00000504157 FYNP06241 537 aa17.87■□□□□ 0.45
POLR2J3-209ENST00000504157 RFC2P35250 354 aa17.87■□□□□ 0.45
POLR2J3-209ENST00000504157 VAC14Q08AM6 782 aa17.87■□□□□ 0.45
POLR2J3-209ENST00000504157 SLC13A2Q13183 592 aa17.87■□□□□ 0.45
POLR2J3-209ENST00000504157 PSMD5Q16401 504 aa17.87■□□□□ 0.45
POLR2J3-209ENST00000504157 PKDCCQ504Y2 493 aa17.87■□□□□ 0.45
POLR2J3-209ENST00000504157 DALRD3Q5D0E6 543 aaKnown RBP17.87■□□□□ 0.45
POLR2J3-209ENST00000504157 MAP1SQ66K74 1059 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms