RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 ZNF699Q32M78 642 aa9.66□□□□□ -0.86
PDLIM5-207ENST00000503974 TRMT5Q32P41 509 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-207ENST00000503974 TIGD5Q53EQ6 642 aa9.66□□□□□ -0.86
PDLIM5-207ENST00000503974 RTP2Q5QGT7 225 aa9.66□□□□□ -0.86
PDLIM5-207ENST00000503974 DDX53Q86TM3 631 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-207ENST00000503974 SLC15A4Q8N697 577 aa9.66□□□□□ -0.86
PDLIM5-207ENST00000503974 LEMD2Q8NC56 503 aa9.66□□□□□ -0.86
PDLIM5-207ENST00000503974 GRPEL2Q8TAA5 225 aa9.66□□□□□ -0.86
PDLIM5-207ENST00000503974 RAB3IL1Q8TBN0 382 aa9.66□□□□□ -0.86
PDLIM5-207ENST00000503974 MGARPQ8TDB4 240 aa9.66□□□□□ -0.86
PDLIM5-207ENST00000503974 NCLNQ969V3 563 aa9.66□□□□□ -0.86
PDLIM5-207ENST00000503974 TMEM169Q96HH4 297 aa9.66□□□□□ -0.86
PDLIM5-207ENST00000503974 BCO2Q9BYV7 579 aa9.66□□□□□ -0.86
PDLIM5-207ENST00000503974 LHX5Q9H2C1 402 aa9.66□□□□□ -0.86
PDLIM5-207ENST00000503974 FAM124BQ9H5Z6 455 aaPredicted RBP9.66□□□□□ -0.86
PDLIM5-207ENST00000503974 NHEJ1Q9H9Q4 299 aaPredicted RBP9.66□□□□□ -0.86
PDLIM5-207ENST00000503974 SLC28A3Q9HAS3 691 aa9.66□□□□□ -0.86
PDLIM5-207ENST00000503974 APOBEC3GQ9HC16 384 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-207ENST00000503974 SIX2Q9NPC8 291 aa9.66□□□□□ -0.86
PDLIM5-207ENST00000503974 SCUBE2Q9NQ36 999 aa9.66□□□□□ -0.86
PDLIM5-207ENST00000503974 CHST7Q9NS84 486 aa9.66□□□□□ -0.86
PDLIM5-207ENST00000503974 ZFP69BQ9UJL9 534 aa9.66□□□□□ -0.86
PDLIM5-207ENST00000503974 RANBP2P49792 3224 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-207ENST00000503974 A0A1W2PQC6 194 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 TMEM120BA0PK00 339 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 PRR23AA6NEV1 266 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 H3BNC9 293 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 H3BRJ5 948 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 PSMD12O00232 456 aaPredicted RBP9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 SYN3O14994 580 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 AXIN1O15169 862 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 CDH16O75309 829 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 PTP4A3O75365 173 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 SOD2P04179 222 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 TYMPP19971 482 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 FGFR3P22607 806 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 GRK2P25098 689 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 FDFT1P37268 417 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 ASPAP45381 313 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 OTUD4Q01804 1114 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 KRT17Q04695 432 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 PON2Q15165 354 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 EXOC3L4Q17RC7 722 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 VSTM1Q6UX27 236 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 IGFN1Q86VF2 1251 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 KLHL7Q8IXQ5 586 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 TOP6BLQ8N6T0 577 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 HASPINQ8TF76 798 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 FIG4Q92562 907 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 KRT35Q92764 455 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 MTBPQ96DY7 904 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 SENP8Q96LD8 212 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 CYTH2Q99418 400 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 C11orf84Q9BUA3 381 aaPredicted RBP9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 CINPQ9BW66 212 aaPredicted RBP9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 GPR62Q9BZJ7 368 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 NIF3L1Q9GZT8 377 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 INTS2Q9H0H0 1204 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 SLC6A17Q9H1V8 727 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 Q9H521 79 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 MCCC2Q9HCC0 563 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 CYP4F12Q9HCS2 524 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 DNMT3BQ9UBC3 853 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 CYB5R1Q9UHQ9 305 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 APPL1Q9UKG1 709 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 PCDHB8Q9UN66 801 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 TRIOBPQ9H2D6 2365 aa9.65□□□□□ -0.86
PDLIM5-207ENST00000503974 MYH10P35580 1976 aa9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 ARHGEF37A1IGU5 675 aa9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 C16orf96A6NNT2 1141 aa9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 SOX1O00570 391 aaPredicted RBP9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 DNAJA2O60884 412 aa9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 NDUFS6O75380 124 aaKnown RBP9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 TADA2AO75478 443 aa9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 CALB1P05937 261 aa9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 CDH1P12830 882 aa9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 SLC9A1P19634 815 aa9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 TGM1P22735 817 aa9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 ST13P50502 369 aaKnown RBP9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 CLCN4P51793 760 aa9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 SLC12A2P55011 1212 aa9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 COPZ1P61923 177 aa9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 AUHQ13825 339 aaKnown RBP9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 ZNF667Q5HYK9 610 aa9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 LPCAT4Q643R3 524 aa9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 UBR7Q8N806 425 aa9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 ICA1LQ8NDH6 482 aa9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 SPPL3Q8TCT6 385 aa9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 C10orf82Q8WW14 230 aa9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 NSL1Q96IY1 281 aa9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 SEC22CQ9BRL7 303 aa9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 PI4K2AQ9BTU6 479 aa9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 MLPHQ9BV36 600 aaPredicted RBP9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 ZBP1Q9H171 429 aa9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 TEKT2Q9UIF3 430 aa9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 TRAF6Q9Y4K3 522 aa9.65□□□□□ -0.87
PDLIM5-207ENST00000503974 C12orf71A8MTZ7 269 aa9.64□□□□□ -0.87
PDLIM5-207ENST00000503974 PI4K2BG5E9Z4 385 aa9.64□□□□□ -0.87
PDLIM5-207ENST00000503974 RNF103O00237 685 aa9.64□□□□□ -0.87
PDLIM5-207ENST00000503974 RASGRF2O14827 1237 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms