RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 TTC30BQ8N4P2 665 aa18.28■□□□□ 0.52
LINC00535-201ENST00000501400 OR4K2Q8NGD2 314 aa18.28■□□□□ 0.52
LINC00535-201ENST00000501400 PPP1R14CQ8TAE6 165 aa18.28■□□□□ 0.52
LINC00535-201ENST00000501400 VOPP1Q96AW1 172 aa18.28■□□□□ 0.52
LINC00535-201ENST00000501400 NXNL1Q96CM4 212 aa18.28■□□□□ 0.52
LINC00535-201ENST00000501400 ZSWIM3Q96MP5 696 aa18.28■□□□□ 0.52
LINC00535-201ENST00000501400 LBHD1Q9BQE6 289 aaPredicted RBP18.28■□□□□ 0.52
LINC00535-201ENST00000501400 ADGRE3Q9BY15 652 aa18.28■□□□□ 0.52
LINC00535-201ENST00000501400 CATSPERZQ9NTU4 200 aa18.28■□□□□ 0.52
LINC00535-201ENST00000501400 ABCB8Q9NUT2 735 aa18.28■□□□□ 0.52
LINC00535-201ENST00000501400 POLR3BQ9NW08 1133 aaPredicted RBP18.28■□□□□ 0.52
LINC00535-201ENST00000501400 MARCOQ9UEW3 520 aaPredicted RBP18.28■□□□□ 0.52
LINC00535-201ENST00000501400 NUP210Q8TEM1 1887 aaPredicted RBP18.28■□□□□ 0.52
LINC00535-201ENST00000501400 PRRC2BQ5JSZ5 2229 aaKnown RBP18.27■□□□□ 0.52
LINC00535-201ENST00000501400 A0A0U1RQS6 177 aa18.27■□□□□ 0.52
LINC00535-201ENST00000501400 XYLBO75191 536 aa18.27■□□□□ 0.52
LINC00535-201ENST00000501400 GLP2RO95838 553 aa18.27■□□□□ 0.52
LINC00535-201ENST00000501400 SLC4A1P02730 911 aa18.27■□□□□ 0.52
LINC00535-201ENST00000501400 CYBBP04839 570 aa18.27■□□□□ 0.52
LINC00535-201ENST00000501400 CEBPBP17676 345 aa18.27■□□□□ 0.52
LINC00535-201ENST00000501400 CTSOP43234 321 aaPredicted RBP18.27■□□□□ 0.52
LINC00535-201ENST00000501400 SLC1A6P48664 564 aa18.27■□□□□ 0.52
LINC00535-201ENST00000501400 CDKN2DP55273 166 aa18.27■□□□□ 0.52
LINC00535-201ENST00000501400 FUT11Q495W5 492 aa18.27■□□□□ 0.52
LINC00535-201ENST00000501400 PITRM1Q5JRX3 1037 aa18.27■□□□□ 0.52
LINC00535-201ENST00000501400 FSTL5Q8N475 847 aaPredicted RBP18.27■□□□□ 0.52
LINC00535-201ENST00000501400 SPATA6LQ8N4H0 392 aa18.27■□□□□ 0.52
LINC00535-201ENST00000501400 LEMD2Q8NC56 503 aa18.27■□□□□ 0.52
LINC00535-201ENST00000501400 OR4L1Q8NH43 312 aa18.27■□□□□ 0.52
LINC00535-201ENST00000501400 LRRC37BQ96QE4 947 aa18.27■□□□□ 0.52
LINC00535-201ENST00000501400 IGSF5Q9NSI5 407 aa18.27■□□□□ 0.52
LINC00535-201ENST00000501400 XPR1Q9UBH6 696 aa18.27■□□□□ 0.52
LINC00535-201ENST00000501400 RUVBL2Q9Y230 463 aaKnown RBP18.27■□□□□ 0.52
LINC00535-201ENST00000501400 PCDHB9Q9Y5E1 797 aa18.27■□□□□ 0.52
LINC00535-201ENST00000501400 A0A087X1B8 175 aa18.27■□□□□ 0.51
LINC00535-201ENST00000501400 KLHL2O95198 593 aa18.27■□□□□ 0.51
LINC00535-201ENST00000501400 APOA4P06727 396 aa18.27■□□□□ 0.51
LINC00535-201ENST00000501400 MYL2P10916 166 aa18.27■□□□□ 0.51
LINC00535-201ENST00000501400 OGNP20774 298 aaKnown RBP18.27■□□□□ 0.51
LINC00535-201ENST00000501400 GRK2P25098 689 aa18.27■□□□□ 0.51
LINC00535-201ENST00000501400 STK19P49842 368 aaPredicted RBP18.27■□□□□ 0.51
LINC00535-201ENST00000501400 ARFIP2P53365 341 aa18.27■□□□□ 0.51
LINC00535-201ENST00000501400 NCALDP61601 193 aa18.27■□□□□ 0.51
LINC00535-201ENST00000501400 ZNF549Q6P9A3 640 aa18.27■□□□□ 0.51
LINC00535-201ENST00000501400 ZYG11AQ6WRX3 759 aa18.27■□□□□ 0.51
LINC00535-201ENST00000501400 CRLF3Q8IUI8 442 aa18.27■□□□□ 0.51
LINC00535-201ENST00000501400 C10orf67Q8IYJ2 551 aa18.27■□□□□ 0.51
LINC00535-201ENST00000501400 EFHBQ8N7U6 833 aa18.27■□□□□ 0.51
LINC00535-201ENST00000501400 SKA1Q96BD8 255 aa18.27■□□□□ 0.51
LINC00535-201ENST00000501400 MYO19Q96H55 970 aa18.27■□□□□ 0.51
LINC00535-201ENST00000501400 UNKQ9C0B0 810 aaKnown RBP18.27■□□□□ 0.51
LINC00535-201ENST00000501400 ZDHHC7Q9NXF8 308 aa18.27■□□□□ 0.51
LINC00535-201ENST00000501400 EVLQ9UI08 416 aaPredicted RBP18.27■□□□□ 0.51
LINC00535-201ENST00000501400 CAPN7Q9Y6W3 813 aa18.27■□□□□ 0.51
LINC00535-201ENST00000501400 TRAFD1O14545 582 aaPredicted RBP18.26■□□□□ 0.51
LINC00535-201ENST00000501400 PGLSO95336 258 aa18.26■□□□□ 0.51
LINC00535-201ENST00000501400 PIGNO95427 931 aa18.26■□□□□ 0.51
LINC00535-201ENST00000501400 ABL2P42684 1182 aa18.26■□□□□ 0.51
LINC00535-201ENST00000501400 MAGEA9P43362 315 aa18.26■□□□□ 0.51
LINC00535-201ENST00000501400 STC1P52823 247 aa18.26■□□□□ 0.51
LINC00535-201ENST00000501400 TIAL1Q01085 375 aaKnown RBP eCLIP18.26■□□□□ 0.51
LINC00535-201ENST00000501400 DGKKQ5KSL6 1271 aa18.26■□□□□ 0.51
LINC00535-201ENST00000501400 MRNIPQ6NTE8 343 aa18.26■□□□□ 0.51
LINC00535-201ENST00000501400 AFTPHQ6ULP2 937 aa18.26■□□□□ 0.51
LINC00535-201ENST00000501400 RBM23Q86U06 439 aaKnown RBP18.26■□□□□ 0.51
LINC00535-201ENST00000501400 CAMK1DQ8IU85 385 aa18.26■□□□□ 0.51
LINC00535-201ENST00000501400 RDH11Q8TC12 318 aa18.26■□□□□ 0.51
LINC00535-201ENST00000501400 ING5Q8WYH8 240 aa18.26■□□□□ 0.51
LINC00535-201ENST00000501400 OXSMQ9NWU1 459 aa18.26■□□□□ 0.51
LINC00535-201ENST00000501400 CRYL1Q9Y2S2 319 aa18.26■□□□□ 0.51
LINC00535-201ENST00000501400 ZNF106Q9H2Y7 1883 aaKnown RBP18.26■□□□□ 0.51
LINC00535-201ENST00000501400 C2orf16Q68DN1 1984 aa18.26■□□□□ 0.51
LINC00535-201ENST00000501400 C2orf81A6NN90 581 aa18.25■□□□□ 0.51
LINC00535-201ENST00000501400 SOBPA7XYQ1 873 aa18.25■□□□□ 0.51
LINC00535-201ENST00000501400 NEDD8-MDP1E9PL57 170 aa18.25■□□□□ 0.51
LINC00535-201ENST00000501400 DNAJC8O75937 253 aaPredicted RBP18.25■□□□□ 0.51
LINC00535-201ENST00000501400 POU2F2P09086 479 aa18.25■□□□□ 0.51
LINC00535-201ENST00000501400 KITP10721 976 aa18.25■□□□□ 0.51
LINC00535-201ENST00000501400 SRCP12931 536 aa18.25■□□□□ 0.51
LINC00535-201ENST00000501400 LPOP22079 712 aaPredicted RBP18.25■□□□□ 0.51
LINC00535-201ENST00000501400 GKP32189 559 aa18.25■□□□□ 0.51
LINC00535-201ENST00000501400 SLC12A2P55011 1212 aa18.25■□□□□ 0.51
LINC00535-201ENST00000501400 SETDB1Q15047 1291 aa18.25■□□□□ 0.51
LINC00535-201ENST00000501400 TMEM207Q6UWW9 146 aa18.25■□□□□ 0.51
LINC00535-201ENST00000501400 MTDHQ86UE4 582 aaKnown RBP18.25■□□□□ 0.51
LINC00535-201ENST00000501400 PIM3Q86V86 326 aa18.25■□□□□ 0.51
LINC00535-201ENST00000501400 HEXDCQ8WVB3 486 aa18.25■□□□□ 0.51
LINC00535-201ENST00000501400 PIH1D2Q8WWB5 315 aa18.25■□□□□ 0.51
LINC00535-201ENST00000501400 RPL10LQ96L21 214 aaKnown RBP18.25■□□□□ 0.51
LINC00535-201ENST00000501400 TSNARE1Q96NA8 513 aa18.25■□□□□ 0.51
LINC00535-201ENST00000501400 TNKS2Q9H2K2 1166 aa18.25■□□□□ 0.51
LINC00535-201ENST00000501400 LINC00597Q9H2U6 94 aa18.25■□□□□ 0.51
LINC00535-201ENST00000501400 KCNK4Q9NYG8 393 aa18.25■□□□□ 0.51
LINC00535-201ENST00000501400 MID2Q9UJV3 735 aa18.25■□□□□ 0.51
LINC00535-201ENST00000501400 DNAJC16Q9Y2G8 782 aa18.25■□□□□ 0.51
LINC00535-201ENST00000501400 YBX2Q9Y2T7 364 aaKnown RBP18.25■□□□□ 0.51
LINC00535-201ENST00000501400 HTRA2O43464 458 aaPredicted RBP18.25■□□□□ 0.51
LINC00535-201ENST00000501400 GRIA4P48058 902 aa18.25■□□□□ 0.51
LINC00535-201ENST00000501400 CSNK1DP48730 415 aa18.25■□□□□ 0.51
LINC00535-201ENST00000501400 ABCE1P61221 599 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms