RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 RPL21P46778 160 aaKnown RBP11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 RPS9P46781 194 aaKnown RBP11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 GPR158Q5T848 1215 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 DNAJC14Q6Y2X3 702 aaPredicted RBP11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 SCGB1C1Q8TD33 95 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 AP5Z1O43299 807 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 SULT1B1O43704 296 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 TFPIP10646 304 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 GRIA3P42263 894 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 BOP1Q14137 746 aaKnown RBP11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 METTL21CQ5VZV1 264 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 RAB12Q6IQ22 244 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 ASB18Q6ZVZ8 466 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 BHLHE22Q8NFJ8 381 aaPredicted RBP11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 RAVER2Q9HCJ3 691 aaKnown RBP11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 PRDM15P57071 1507 aaPredicted RBP11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 GMFGO60234 142 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 ZNF792Q3KQV3 632 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 CIR1Q86X95 450 aaPredicted RBP11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 LENG9Q96B70 501 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 ANKEF1Q9NU02 776 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 PCDHA3Q9Y5H8 950 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 GRXCR2A6NFK2 248 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 SLC9A3R1O14745 358 aaPredicted RBP11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 CST1P01037 141 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 CRISP1P54107 249 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 KCNMB4Q86W47 210 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 ZDHHC17Q8IUH5 632 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 ZC3H7AQ8IWR0 971 aaKnown RBP11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 Q8N402 240 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 FCGR1BQ92637 280 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 ZNF578Q96N58 590 aaPredicted RBP11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 FAM105AQ9NUU6 356 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 MTMR4Q9NYA4 1195 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 EIF3KQ9UBQ5 218 aaKnown RBP11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 C14orf166Q9Y224 244 aaKnown RBP11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 NPHP3-ACAD11A0A0J9YXS1 232 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 PAPSS2O95340 614 aaPredicted RBP11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 PIGNO95427 931 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 SRGNP10124 158 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 SRSF11Q05519 484 aaKnown RBP11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 PUS10Q3MIT2 529 aaKnown RBP11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 C3orf33Q6P1S2 294 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 USP43Q70EL4 1123 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 MARK4Q96L34 752 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 CHRAC1Q9NRG0 131 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 H3BM21 787 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 CSF1RP07333 972 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 ANXA3P12429 323 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 CCR1P32246 355 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 TLE3Q04726 772 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 C1QBPQ07021 282 aaKnown RBP11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 TKFCQ3LXA3 575 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 XKRXQ6PP77 449 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 ZNF730Q6ZMV8 503 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 SLC34A3Q8N130 599 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 ZNF398Q8TD17 642 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 APOPT1Q96IL0 206 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 ANKRA2Q9H9E1 313 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 PCDH9Q9HC56 1237 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 CYTH4Q9UIA0 394 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 COG5Q9UP83 839 aa11.22□□□□□ -0.61
AC055713.1-201ENST00000498967 DOCK9Q9BZ29 2069 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 DHRS12A0PJE2 317 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 TBX3O15119 743 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 NTRK1P04629 796 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 MBL2P11226 248 aaPredicted RBP11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 MAPK3P27361 379 aaPredicted RBP11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 SLC16A9Q7RTY1 509 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 RNF180Q86T96 592 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 TEX19Q8NA77 164 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 IL22Q9GZX6 179 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 TMPRSS11EQ9UL52 423 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 HSPA12AO43301 675 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 PRKD3O94806 890 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 RAB39AQ14964 217 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 PLEKHG4Q58EX7 1191 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 KANSL1Q7Z3B3 1105 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 SLC9B2Q86UD5 537 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 CFAP206Q8IYR0 622 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 ANKRD13AQ8IZ07 590 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 NKAPQ8N5F7 415 aaKnown RBP11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 DCXO43602 365 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 ITGA10O75578 1167 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 ANGPTL1O95841 491 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 FGBP02675 491 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 TACSTD2P09758 323 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 GZMAP12544 262 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 GRIA2P42262 883 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 DYNLL1P63167 89 aaKnown RBP11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 MRPS22P82650 360 aaKnown RBP11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 GRK1Q15835 563 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 ACAD10Q6JQN1 1059 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 FAM83HQ6ZRV2 1179 aaPredicted RBP11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 HTRA1Q92743 480 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 ANTXR1Q9H6X2 564 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 PCDHGC3Q9UN70 934 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 SAMD9LQ8IVG5 1584 aa11.21□□□□□ -0.61
AC055713.1-201ENST00000498967 STMND1H3BQB6 276 aa11.21□□□□□ -0.62
AC055713.1-201ENST00000498967 RAMP2O60895 175 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms