RNA–Protein interactions for RNA: ENST00000498628.6

CDKN2A-209, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-209ENST00000498628 PROSCO94903 275 aa17.02■□□□□ 0.32
CDKN2A-209ENST00000498628 CR2P20023 1033 aa17.02■□□□□ 0.32
CDKN2A-209ENST00000498628 TGM2P21980 687 aa17.02■□□□□ 0.32
CDKN2A-209ENST00000498628 CA4P22748 312 aa17.02■□□□□ 0.32
CDKN2A-209ENST00000498628 RBMS1P29558 406 aaKnown RBP17.02■□□□□ 0.32
CDKN2A-209ENST00000498628 GABREP78334 506 aa17.02■□□□□ 0.32
CDKN2A-209ENST00000498628 SLC18A3Q16572 532 aa17.02■□□□□ 0.32
CDKN2A-209ENST00000498628 IFI16Q16666 785 aaKnown RBP17.02■□□□□ 0.32
CDKN2A-209ENST00000498628 ISXQ2M1V0 245 aa17.02■□□□□ 0.32
CDKN2A-209ENST00000498628 SPECC1LQ69YQ0 1117 aa17.02■□□□□ 0.32
CDKN2A-209ENST00000498628 TXNRD3NBQ6F5E7 133 aa17.02■□□□□ 0.32
CDKN2A-209ENST00000498628 PNCKQ6P2M8 343 aa17.02■□□□□ 0.32
CDKN2A-209ENST00000498628 USP45Q70EL2 814 aa17.02■□□□□ 0.32
CDKN2A-209ENST00000498628 FAM71BQ8TC56 605 aa17.02■□□□□ 0.32
CDKN2A-209ENST00000498628 FUBP1Q96AE4 644 aaKnown RBP17.02■□□□□ 0.32
CDKN2A-209ENST00000498628 NUS1Q96E22 293 aa17.02■□□□□ 0.32
CDKN2A-209ENST00000498628 POLR1EQ9GZS1 481 aaKnown RBP17.02■□□□□ 0.32
CDKN2A-209ENST00000498628 PHPT1Q9NRX4 125 aaPredicted RBP17.02■□□□□ 0.32
CDKN2A-209ENST00000498628 AMACRQ9UHK6 382 aa17.02■□□□□ 0.32
CDKN2A-209ENST00000498628 MOSPD1Q9UJG1 213 aa17.02■□□□□ 0.32
CDKN2A-209ENST00000498628 PNMA8BQ9ULN7 279 aaPredicted RBP17.02■□□□□ 0.32
CDKN2A-209ENST00000498628 PCDHB1Q9Y5F3 818 aa17.02■□□□□ 0.32
CDKN2A-209ENST00000498628 DMXL2Q8TDJ6 3036 aa17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 EIF4E1BA6NMX2 242 aaKnown RBP17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 PSMD11O00231 422 aa17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 TLX3O43711 291 aaPredicted RBP17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 AKR1B10O60218 316 aa17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 PEX11BO96011 259 aa17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 MX2P20592 715 aa17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 GJC1P36383 396 aa17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 TRIM23P36406 574 aa17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 ERVPABLB-1P60509 514 aa17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 PEX6Q13608 980 aa17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 SPIDRQ14159 915 aa17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 TAF8Q7Z7C8 310 aa17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 TEX26Q8N6G2 289 aa17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 PLA2G15Q8NCC3 412 aa17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 ZNF248Q8NDW4 579 aa17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 PCDH19Q8TAB3 1148 aa17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 SCRN2Q96FV2 425 aa17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 RBM15Q96T37 977 aaKnown RBP eCLIP17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 CCDC3Q9BQI4 270 aa17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 ZNF670Q9BS34 389 aa17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 SYNDIG1Q9H7V2 258 aa17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 NT5MQ9NPB1 228 aa17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 THSD1Q9NS62 852 aa17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 URB1O60287 2271 aaKnown RBP17.01■□□□□ 0.31
CDKN2A-209ENST00000498628 FAM208BQ5VWN6 2430 aa17■□□□□ 0.31
CDKN2A-209ENST00000498628 SPEGQ15772 3267 aa17■□□□□ 0.31
CDKN2A-209ENST00000498628 SSU72P8A0A1W2PR75 194 aa17■□□□□ 0.31
CDKN2A-209ENST00000498628 TTC24A2A3L6 582 aaPredicted RBP17■□□□□ 0.31
CDKN2A-209ENST00000498628 MATN3O15232 486 aa17■□□□□ 0.31
CDKN2A-209ENST00000498628 DXOO77932 396 aaKnown RBP17■□□□□ 0.31
CDKN2A-209ENST00000498628 HEXIM1O94992 359 aaKnown RBP17■□□□□ 0.31
CDKN2A-209ENST00000498628 PGLSO95336 258 aa17■□□□□ 0.31
CDKN2A-209ENST00000498628 MPOP05164 745 aa17■□□□□ 0.31
CDKN2A-209ENST00000498628 IL4RP24394 825 aa17■□□□□ 0.31
CDKN2A-209ENST00000498628 CCNCP24863 283 aa17■□□□□ 0.31
CDKN2A-209ENST00000498628 GARSP41250 739 aaKnown RBP17■□□□□ 0.31
CDKN2A-209ENST00000498628 PCBP4P57723 403 aaKnown RBP17■□□□□ 0.31
CDKN2A-209ENST00000498628 MAXP61244 160 aa17■□□□□ 0.31
CDKN2A-209ENST00000498628 MMRN1Q13201 1228 aa17■□□□□ 0.31
CDKN2A-209ENST00000498628 DPYSL3Q14195 570 aa17■□□□□ 0.31
CDKN2A-209ENST00000498628 PAFAH1B3Q15102 231 aaKnown RBP17■□□□□ 0.31
CDKN2A-209ENST00000498628 ANKRD20A8PQ5CZ79 823 aa17■□□□□ 0.31
CDKN2A-209ENST00000498628 BROXQ5VW32 411 aa17■□□□□ 0.31
CDKN2A-209ENST00000498628 DENND2CQ68D51 928 aa17■□□□□ 0.31
CDKN2A-209ENST00000498628 PGBD5Q8N414 524 aa17■□□□□ 0.31
CDKN2A-209ENST00000498628 COQ10AQ96MF6 247 aa17■□□□□ 0.31
CDKN2A-209ENST00000498628 ZNF830Q96NB3 372 aaPredicted RBP17■□□□□ 0.31
CDKN2A-209ENST00000498628 LGMNQ99538 433 aa17■□□□□ 0.31
CDKN2A-209ENST00000498628 SEMA3CQ99985 751 aa17■□□□□ 0.31
CDKN2A-209ENST00000498628 SIRPGQ9P1W8 387 aa17■□□□□ 0.31
CDKN2A-209ENST00000498628 DNPEPQ9ULA0 475 aa17■□□□□ 0.31
CDKN2A-209ENST00000498628 RAI2Q9Y5P3 530 aa17■□□□□ 0.31
CDKN2A-209ENST00000498628 CHD6Q8TD26 2715 aa17■□□□□ 0.31
CDKN2A-209ENST00000498628 CFAP47Q6ZTR5 3102 aa17■□□□□ 0.31
CDKN2A-209ENST00000498628 MYLKQ15746 1914 aa17■□□□□ 0.31
CDKN2A-209ENST00000498628 PKD1L2Q7Z442 2459 aa16.99■□□□□ 0.31
CDKN2A-209ENST00000498628 ZFHX4Q86UP3 3567 aa16.99■□□□□ 0.31
CDKN2A-209ENST00000498628 TMEM202A6NGA9 273 aa16.99■□□□□ 0.31
CDKN2A-209ENST00000498628 ZW10O43264 779 aa16.99■□□□□ 0.31
CDKN2A-209ENST00000498628 TMEM253P0C7T8 217 aa16.99■□□□□ 0.31
CDKN2A-209ENST00000498628 MYCLP1P12525 358 aaPredicted RBP16.99■□□□□ 0.31
CDKN2A-209ENST00000498628 MAN1A1P33908 653 aa16.99■□□□□ 0.31
CDKN2A-209ENST00000498628 EPHB1P54762 984 aa16.99■□□□□ 0.31
CDKN2A-209ENST00000498628 GALNT2Q10471 571 aa16.99■□□□□ 0.31
CDKN2A-209ENST00000498628 TRAF2Q12933 501 aa16.99■□□□□ 0.31
CDKN2A-209ENST00000498628 CNGA3Q16281 694 aa16.99■□□□□ 0.31
CDKN2A-209ENST00000498628 ODF2Q5BJF6 829 aa16.99■□□□□ 0.31
CDKN2A-209ENST00000498628 PERM1Q5SV97 790 aa16.99■□□□□ 0.31
CDKN2A-209ENST00000498628 CRTC1Q6UUV9 634 aa16.99■□□□□ 0.31
CDKN2A-209ENST00000498628 FAM46DQ8NEK8 389 aa16.99■□□□□ 0.31
CDKN2A-209ENST00000498628 WDR36Q8NI36 951 aaKnown RBP16.99■□□□□ 0.31
CDKN2A-209ENST00000498628 OR1E3Q8WZA6 343 aa16.99■□□□□ 0.31
CDKN2A-209ENST00000498628 FATE1Q969F0 183 aa16.99■□□□□ 0.31
CDKN2A-209ENST00000498628 CCDC97Q96F63 343 aaPredicted RBP16.99■□□□□ 0.31
CDKN2A-209ENST00000498628 CCDC42Q96M95 316 aa16.99■□□□□ 0.31
CDKN2A-209ENST00000498628 CYP4F12Q9HCS2 524 aa16.99■□□□□ 0.31
CDKN2A-209ENST00000498628 RBM22Q9NW64 420 aaKnown RBP eCLIP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms