RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 TNFSF14O43557 240 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 HEXIM1O94992 359 aaKnown RBP12.83□□□□□ -0.36
HSPG2-213ENST00000498495 TJP3O95049 919 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 LDOC1O95751 146 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-213ENST00000498495 FTCDO95954 541 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 TRBC1P01850 177 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 APOC2P02655 101 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 CSF2P04141 144 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 PCCBP05166 539 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 PTMAP06454 111 aaKnown RBP12.83□□□□□ -0.36
HSPG2-213ENST00000498495 ALPIP09923 528 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 PYGMP11217 842 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 DGKAP23743 735 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 PTPN3P26045 913 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 HTR1BP28222 390 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 ATP5OP48047 213 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 RPL26P61254 145 aaKnown RBP12.83□□□□□ -0.36
HSPG2-213ENST00000498495 SKOR1P84550 965 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 FOXC1Q12948 553 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 XRCC4Q13426 336 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 PRKD1Q15139 912 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-213ENST00000498495 CNGA3Q16281 694 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 HS1BP3Q53T59 392 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 FAM182AQ5T1J6 154 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 KDM7AQ6ZMT4 941 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 PID1Q7Z2X4 250 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 GLRX5Q86SX6 157 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 SLC25A45Q8N413 288 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 BAHD1Q8TBE0 780 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-213ENST00000498495 ALG3Q92685 438 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 TEKT5Q96M29 485 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 MCCC1Q96RQ3 725 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-213ENST00000498495 RBM15Q96T37 977 aaKnown RBP eCLIP12.83□□□□□ -0.36
HSPG2-213ENST00000498495 FERMT1Q9BQL6 677 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 ADGRE3Q9BY15 652 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 SLC25A51Q9H1U9 297 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 FTSJ1Q9UET6 329 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 PACSIN2Q9UNF0 486 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-213ENST00000498495 RPL26L1Q9UNX3 145 aaKnown RBP12.83□□□□□ -0.36
HSPG2-213ENST00000498495 APOBEC2Q9Y235 224 aaKnown RBP12.83□□□□□ -0.36
HSPG2-213ENST00000498495 SPTBN4Q9H254 2564 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 LAMA1P25391 3075 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 PCNX2A6NKB5 2137 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 KNL1Q8NG31 2342 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 NPIPB15A6NHN6 443 aaPredicted RBP12.82□□□□□ -0.36
HSPG2-213ENST00000498495 ANKRD66B4E2M5 251 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 PSMD11O00231 422 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 PIAS2O75928 621 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 TRIM16O95361 564 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 PRLP01236 227 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 MMP2P08253 660 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 CCDC175P0C221 793 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 NME1P15531 152 aaKnown RBP12.82□□□□□ -0.36
HSPG2-213ENST00000498495 JUNDP17535 347 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 PMLP29590 882 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 PTPN7P35236 360 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 EIF2B5Q13144 721 aaKnown RBP12.82□□□□□ -0.36
HSPG2-213ENST00000498495 MTM1Q13496 603 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 PTPRRQ15256 657 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 TPRG1LQ5T0D9 272 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 FAXCQ5TGI0 409 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 CCDC70Q6NSX1 233 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 PNCKQ6P2M8 343 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 CRTC1Q6UUV9 634 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 ENPP7Q6UWV6 458 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 KDELC2Q7Z4H8 507 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 HSD11B1LQ7Z5J1 315 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 TSPAN33Q86UF1 283 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 CBARPQ8N350 705 aaPredicted RBP12.82□□□□□ -0.36
HSPG2-213ENST00000498495 LPCAT1Q8NF37 534 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 ATL2Q8NHH9 583 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 ACTL9Q8TC94 416 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 UBE2Q2Q8WVN8 375 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 BTN2A2Q8WVV5 523 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 HTR3CQ8WXA8 447 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 NUS1Q96E22 293 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 IMP4Q96G21 291 aaKnown RBP12.82□□□□□ -0.36
HSPG2-213ENST00000498495 CNDP2Q96KP4 475 aaKnown RBP12.82□□□□□ -0.36
HSPG2-213ENST00000498495 COQ10AQ96MF6 247 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 VAT1Q99536 393 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 MLPHQ9BV36 600 aaPredicted RBP12.82□□□□□ -0.36
HSPG2-213ENST00000498495 GLOD4Q9HC38 313 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 KLHL8Q9P2G9 620 aaPredicted RBP12.82□□□□□ -0.36
HSPG2-213ENST00000498495 DNPEPQ9ULA0 475 aa12.82□□□□□ -0.36
HSPG2-213ENST00000498495 GOLGA6L9A6NEM1 432 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 CACNB4O00305 520 aaPredicted RBP12.81□□□□□ -0.36
HSPG2-213ENST00000498495 DDX3YO15523 660 aaKnown RBP12.81□□□□□ -0.36
HSPG2-213ENST00000498495 ATXN1LP0C7T5 689 aaKnown RBP12.81□□□□□ -0.36
HSPG2-213ENST00000498495 FTH1P19P0C7X4 201 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 ALPPL2P10696 532 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 ZNF30P17039 623 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 GM2AP17900 193 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 LHCGRP22888 699 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 ETV3P41162 512 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 BLKP51451 505 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 OTUD4Q01804 1114 aaKnown RBP12.81□□□□□ -0.36
HSPG2-213ENST00000498495 PPARDQ03181 441 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 PTSQ03393 145 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 WASHC5Q12768 1159 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 ZNF211Q13398 564 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms