RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 SF3A3Q12874 501 aaKnown RBP eCLIP8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 MSLNQ13421 630 aaPredicted RBP8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 DMC1Q14565 340 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 ITIH4Q14624 930 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 USP10Q14694 798 aaKnown RBP8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 CBX2Q14781 532 aaPredicted RBP8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 PCLAFQ15004 111 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 DLG2Q15700 870 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 CCDC153Q494R4 210 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 MRNIPQ6NTE8 343 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 PTAR1Q7Z6K3 402 aaPredicted RBP8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 CILP2Q8IUL8 1156 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 PCDH20Q8N6Y1 951 aaKnown RBP8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 OR2AP1Q8NGE2 309 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 RAB3IL1Q8TBN0 382 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 HDAC10Q969S8 669 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 GRAMD1AQ96CP6 724 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 MRPL38Q96DV4 380 aaKnown RBP8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 TSPAN17Q96FV3 270 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 LMLNQ96KR4 655 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 ZSWIM3Q96MP5 696 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 ELAC2Q9BQ52 826 aaKnown RBP8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 MECRQ9BV79 373 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 APOL5Q9BWW9 433 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 TSSK1BQ9BXA7 367 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 CEP44Q9C0F1 390 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 ZDHHC6Q9H6R6 413 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 NLE1Q9NVX2 485 aaPredicted RBP8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 DUS2Q9NX74 493 aaKnown RBP8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 EMCNQ9ULC0 261 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 CORO1CQ9ULV4 474 aaPredicted RBP8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 PHTF1Q9UMS5 762 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 HS3ST2Q9Y278 367 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 KCTD3Q9Y597 815 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 BRWD1Q9NSI6 2320 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 DOCK9Q9BZ29 2069 aa8.1□□□□□ -1.11
PDZRN3-212ENST00000498048 LAMA2P24043 3122 aaKnown RBP8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 TRPM6Q9BX84 2022 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 A0A087X1B8 175 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 CCDC162PA2VCL2 907 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 CAPN8A6NHC0 703 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 AURKAO14965 403 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 STX7O15400 261 aaKnown RBP8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 HOXC11O43248 304 aaPredicted RBP8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 BNIP3LO60238 219 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 FZD6O60353 706 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 SNX3O60493 162 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 PLIN3O60664 434 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 PAPLNO95428 1278 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 NFATC1O95644 943 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 GLP2RO95838 553 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 PRLP01236 227 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 PROCP04070 461 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 APOA4P06727 396 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 BPGMP07738 259 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 TROVE2P10155 538 aaKnown RBP eCLIP8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 STMN1P16949 149 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 CTPS1P17812 591 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 POLR2EP19388 210 aaKnown RBP8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 LPOP22079 712 aaPredicted RBP8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 SP100P23497 879 aaPredicted RBP8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 WEE1P30291 646 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 GMPRP36959 345 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 CSNK1DP48730 415 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 CCNHP51946 323 aaPredicted RBP8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 STC1P52823 247 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 RAB10P61026 200 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 RPL26P61254 145 aaKnown RBP8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 POU4F1Q01851 419 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 SLC20A2Q08357 652 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 ILF2Q12905 390 aaKnown RBP8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 ZNF460Q14592 562 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 PTPRCAPQ14761 206 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 CHI3L2Q15782 390 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 INSCQ1MX18 579 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 TYSND1Q2T9J0 566 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 EML3Q32P44 896 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 PROX2Q3B8N5 592 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 FASTKD1Q53R41 847 aaKnown RBP8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 RBM20Q5T481 1227 aaKnown RBP8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 ATG16L1Q676U5 607 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 MBLAC2Q68D91 279 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 FAM45BPQ6NSW5 357 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 CGB2Q6NT52 195 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 C16orf46Q6P387 395 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 CNSTQ6PJW8 725 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 CLEC14AQ86T13 490 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 TTC30BQ8N4P2 665 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 KIAA1958Q8N8K9 716 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 ACVR1CQ8NER5 493 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 OR4K2Q8NGD2 314 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 PPP1R14CQ8TAE6 165 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 TTC8Q8TAM2 541 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 FAM45AQ8TCE6 357 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 BPIFB1Q8TDL5 484 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 WFIKKN2Q8TEU8 576 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 OSCP1Q8WVF1 389 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 SREK1Q8WXA9 508 aaKnown RBP8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 ZNF75CPQ92670 426 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms