RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 NAP1L5Q96NT1 182 aaPredicted RBP11.81□□□□□ -0.52
NUDCD3-211ENST00000497978 SLC46A1Q96NT5 459 aa11.81□□□□□ -0.52
NUDCD3-211ENST00000497978 RBM15Q96T37 977 aaKnown RBP eCLIP11.81□□□□□ -0.521e-6■■■■□ 25.7
NUDCD3-211ENST00000497978 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.81□□□□□ -0.52
NUDCD3-211ENST00000497978 ISCUQ9H1K1 167 aa11.81□□□□□ -0.52
NUDCD3-211ENST00000497978 ASCL3Q9NQ33 180 aa11.81□□□□□ -0.52
NUDCD3-211ENST00000497978 KCTD5Q9NXV2 234 aa11.81□□□□□ -0.52
NUDCD3-211ENST00000497978 PCDHGA8Q9Y5G5 932 aa11.81□□□□□ -0.52
NUDCD3-211ENST00000497978 DGKBQ9Y6T7 804 aa11.81□□□□□ -0.52
NUDCD3-211ENST00000497978 ANKRD36A6QL64 1941 aa11.81□□□□□ -0.52
NUDCD3-211ENST00000497978 RP1P56715 2156 aa11.81□□□□□ -0.52
NUDCD3-211ENST00000497978 CCDC187A0A096LP49 1063 aa11.8□□□□□ -0.52
NUDCD3-211ENST00000497978 PDE2AO00408 941 aaPredicted RBP11.8□□□□□ -0.52
NUDCD3-211ENST00000497978 TRAFD1O14545 582 aaPredicted RBP11.8□□□□□ -0.52
NUDCD3-211ENST00000497978 TNFRSF10CO14798 259 aa11.8□□□□□ -0.52
NUDCD3-211ENST00000497978 KLK10O43240 276 aa11.8□□□□□ -0.52
NUDCD3-211ENST00000497978 HOXC4P09017 264 aaPredicted RBP11.8□□□□□ -0.52
NUDCD3-211ENST00000497978 AMPD1P23109 780 aa11.8□□□□□ -0.52
NUDCD3-211ENST00000497978 SERPINB6P35237 376 aa11.8□□□□□ -0.52
NUDCD3-211ENST00000497978 SLC10A7Q0GE19 358 aa11.8□□□□□ -0.52
NUDCD3-211ENST00000497978 C19orf57Q0VDD7 668 aa11.8□□□□□ -0.52
NUDCD3-211ENST00000497978 RALGDSQ12967 914 aa11.8□□□□□ -0.52
NUDCD3-211ENST00000497978 NR1I3Q14994 352 aa11.8□□□□□ -0.52
NUDCD3-211ENST00000497978 TSR1Q2NL82 804 aaKnown RBP11.8□□□□□ -0.52
NUDCD3-211ENST00000497978 SMTNL2Q2TAL5 461 aa11.8□□□□□ -0.52
NUDCD3-211ENST00000497978 TAF8Q7Z7C8 310 aa11.8□□□□□ -0.52
NUDCD3-211ENST00000497978 PLA2G15Q8NCC3 412 aa11.8□□□□□ -0.52
NUDCD3-211ENST00000497978 PDCD6IPQ8WUM4 868 aaKnown RBP11.8□□□□□ -0.52
NUDCD3-211ENST00000497978 CCDC74AQ96AQ1 378 aa11.8□□□□□ -0.52
NUDCD3-211ENST00000497978 GFM1Q96RP9 751 aaKnown RBP11.8□□□□□ -0.52
NUDCD3-211ENST00000497978 STRADBQ9C0K7 418 aa11.8□□□□□ -0.52
NUDCD3-211ENST00000497978 WDR26Q9H7D7 661 aa11.8□□□□□ -0.52
NUDCD3-211ENST00000497978 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.8□□□□□ -0.52
NUDCD3-211ENST00000497978 MOSPD1Q9UJG1 213 aa11.8□□□□□ -0.52
NUDCD3-211ENST00000497978 CELSR3Q9NYQ7 3312 aa11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 A0A1W2PQJ5 194 aa11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 A8MX80 341 aa11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 NTN3O00634 580 aaPredicted RBP11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 SOCS5O75159 536 aa11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 CPP00450 1065 aa11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 CYP2A6P11509 494 aaPredicted RBP11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 IL1R2P27930 398 aa11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 TRIM23P36406 574 aa11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 RALGPS1Q5JS13 557 aa11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 PNCKQ6P2M8 343 aa11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 POLNQ7Z5Q5 900 aa11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 ATPAF2Q8N5M1 289 aa11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 FAM46DQ8NEK8 389 aa11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 TEKT4Q8WW24 435 aa11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 OR1E3Q8WZA6 343 aa11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 SYN2Q92777 582 aaPredicted RBP11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 FUBP1Q96AE4 644 aaKnown RBP11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 NUS1Q96E22 293 aa11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 PDXPQ96GD0 296 aa11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 LIN37Q96GY3 246 aaPredicted RBP11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 CSPG4P5Q96PW8 444 aa11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 NUDCD1Q96RS6 583 aa11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 B4GALT6Q9UBX8 382 aa11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 IP6K2Q9UHH9 426 aa11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 PHTF1Q9UMS5 762 aa11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 PCDHGC4Q9Y5F7 938 aa11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 ITPR1Q14643 2758 aa11.79□□□□□ -0.52
NUDCD3-211ENST00000497978 PTPRQQ9UMZ3 2332 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 LRP4O75096 1905 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 A0A1W2PNU3 283 aaPredicted RBP11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 TTC24A2A3L6 582 aaPredicted RBP11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 TMEM202A6NGA9 273 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 HTRA2O43464 458 aaPredicted RBP11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 MAFKO60675 156 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 TNFSF15O95150 251 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 SERPING1P05155 500 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 RPLP0P05388 317 aaKnown RBP11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 RARAP10276 462 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 KRT10P13645 584 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 VIPR1P32241 457 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 SSR1P43307 286 aaKnown RBP11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 MMP13P45452 471 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 CDH6P55285 790 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 CCL7P80098 99 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 RHDQ02161 417 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 EIF3IQ13347 325 aaKnown RBP11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 KRT81Q14533 505 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 IQCB1Q15051 598 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 NFKBIBQ15653 356 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 ARHGAP40Q5TG30 622 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 MARC1Q5VT66 337 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 DENND2CQ68D51 928 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 LRRC49Q8IUZ0 686 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 TP53INP2Q8IXH6 220 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 NDUFAF2Q8N183 169 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 NIPA2Q8N8Q9 360 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 GPR156Q8NFN8 814 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 IQCDQ96DY2 449 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 PRR11Q96HE9 360 aaPredicted RBP11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 COQ10AQ96MF6 247 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 TMEM74Q96NL1 305 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 MGME1Q9BQP7 344 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 THAP2Q9H0W7 228 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 LRRN3Q9H3W5 708 aa11.78□□□□□ -0.52
NUDCD3-211ENST00000497978 DPEP2Q9H4A9 486 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms