RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 TNFSF14O43557 240 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 TIPRLO75663 272 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 SEC31AO94979 1220 aaKnown RBP3.35□□□□□ -1.87
PSPC1-205ENST00000497722 VNN2O95498 520 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 EPHA8P29322 1005 aaPredicted RBP3.35□□□□□ -1.87
PSPC1-205ENST00000497722 STX2P32856 288 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 PIGAP37287 484 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 AMTP48728 403 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 NAP1L1P55209 391 aaKnown RBP3.35□□□□□ -1.87
PSPC1-205ENST00000497722 GEMIN4P57678 1058 aaKnown RBP3.35□□□□□ -1.87
PSPC1-205ENST00000497722 ARF3P61204 181 aaPredicted RBP3.35□□□□□ -1.87
PSPC1-205ENST00000497722 RPS3AP61247 264 aaKnown RBP3.35□□□□□ -1.87
PSPC1-205ENST00000497722 ARF1P84077 181 aaKnown RBP3.35□□□□□ -1.87
PSPC1-205ENST00000497722 LMOD3Q0VAK6 560 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 GRIK3Q13003 919 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 HNF4GQ14541 408 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 DRAP1Q14919 205 aaPredicted RBP3.35□□□□□ -1.87
PSPC1-205ENST00000497722 NFATC4Q14934 902 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 SHBQ15464 509 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 COL28A1Q2UY09 1125 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 TDRD12Q587J7 1177 aaKnown RBP3.35□□□□□ -1.87
PSPC1-205ENST00000497722 NADSYN1Q6IA69 706 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 INO80CQ6PI98 192 aaPredicted RBP3.35□□□□□ -1.87
PSPC1-205ENST00000497722 CCDC13Q8IYE1 715 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 ZBTB2Q8N680 514 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 FRMD1Q8N878 549 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 BEST2Q8NFU1 509 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 ERGIC1Q969X5 290 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 NCAPGQ9BPX3 1015 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 EIF2B3Q9NR50 452 aaKnown RBP3.35□□□□□ -1.87
PSPC1-205ENST00000497722 SLC6A13Q9NSD5 602 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 RRP7BPQ9NSQ0 103 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 EHD2Q9NZN4 543 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 DLGAP2Q9P1A6 1054 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 MKLN1Q9UL63 735 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 SNX9Q9Y5X1 595 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 SCINQ9Y6U3 715 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 UTYO14607 1347 aa3.35□□□□□ -1.87
PSPC1-205ENST00000497722 IGHV4-28A0A0C4DH34 117 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 B4E171 279 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 NPIPB11E5RHQ5 1161 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 AP3D1O14617 1153 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 RNASEH2AO75792 299 aaKnown RBP3.34□□□□□ -1.87
PSPC1-205ENST00000497722 IPO7O95373 1038 aaKnown RBP3.34□□□□□ -1.87
PSPC1-205ENST00000497722 MMP2P08253 660 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 IL7RP16871 459 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 ITGAXP20702 1163 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 GNLYP22749 145 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 GPTP24298 496 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 CHATP28329 748 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 TSPAN7P41732 249 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 PIK3CAP42336 1068 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 PDLIM4P50479 330 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 KRTAP10-5P60370 271 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 OLR1P78380 273 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 SETQ01105 290 aaPredicted RBP3.34□□□□□ -1.87
PSPC1-205ENST00000497722 DDR1Q08345 913 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 KIF5AQ12840 1032 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 TMEM115Q12893 351 aaPredicted RBP3.34□□□□□ -1.87
PSPC1-205ENST00000497722 NAE1Q13564 534 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 CTTNQ14247 550 aaKnown RBP3.34□□□□□ -1.87
PSPC1-205ENST00000497722 SLC39A14Q15043 492 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 ZSCAN23Q3MJ62 389 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 MMEL1Q495T6 779 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 WDR78Q5VTH9 848 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 TXNDC8Q6A555 127 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 FBXO46Q6PJ61 603 aaPredicted RBP3.34□□□□□ -1.87
PSPC1-205ENST00000497722 USP43Q70EL4 1123 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 NOXA1Q86UR1 476 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 ZC3HC1Q86WB0 502 aaKnown RBP3.34□□□□□ -1.87
PSPC1-205ENST00000497722 TEX11Q8IYF3 940 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 AGBL3Q8NEM8 1001 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 HUS1BQ8NHY5 278 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 POMGNT1Q8WZA1 660 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 INTS12Q96CB8 462 aaKnown RBP3.34□□□□□ -1.87
PSPC1-205ENST00000497722 PABPC5Q96DU9 382 aaKnown RBP3.34□□□□□ -1.87
PSPC1-205ENST00000497722 LRFN5Q96NI6 719 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 NR1H4Q96RI1 486 aaPredicted RBP3.34□□□□□ -1.87
PSPC1-205ENST00000497722 MSTO1Q9BUK6 570 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 FTOQ9C0B1 505 aaKnown RBP eCLIP3.34□□□□□ -1.87
PSPC1-205ENST00000497722 UBA5Q9GZZ9 404 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 USP44Q9H0E7 712 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 SH2D4AQ9H788 454 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 ZNF556Q9HAH1 456 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 SLC28A3Q9HAS3 691 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 CLK4Q9HAZ1 481 aaKnown RBP3.34□□□□□ -1.87
PSPC1-205ENST00000497722 FBXO9Q9UK97 447 aaPredicted RBP3.34□□□□□ -1.87
PSPC1-205ENST00000497722 TTC7AQ9ULT0 858 aaPredicted RBP3.34□□□□□ -1.87
PSPC1-205ENST00000497722 CDC14AQ9UNH5 594 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 KCNE2Q9Y6J6 123 aa3.34□□□□□ -1.87
PSPC1-205ENST00000497722 A0A087WYN8 130 aa3.33□□□□□ -1.88
PSPC1-205ENST00000497722 A0A0U1RQF3 1178 aa3.33□□□□□ -1.88
PSPC1-205ENST00000497722 FAM237BA0A1B0GVD1 139 aa3.33□□□□□ -1.88
PSPC1-205ENST00000497722 DYTNA2CJ06 578 aa3.33□□□□□ -1.88
PSPC1-205ENST00000497722 TMEM202A6NGA9 273 aa3.33□□□□□ -1.88
PSPC1-205ENST00000497722 HMGB1P1B2RPK0 211 aaPredicted RBP3.33□□□□□ -1.88
PSPC1-205ENST00000497722 TIMM23O14925 209 aa3.33□□□□□ -1.88
PSPC1-205ENST00000497722 ZIC3O60481 467 aa3.33□□□□□ -1.88
PSPC1-205ENST00000497722 SLC25A12O75746 678 aa3.33□□□□□ -1.88
PSPC1-205ENST00000497722 SOX30O94993 753 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms