RNA–Protein interactions for RNA: ENST00000497658.5

PHC3-217, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 2,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-217ENST00000497658 DEPDC1Q5TB30 811 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 EGFLAMQ63HQ2 1017 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 TMEM53Q6P2H8 277 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 ZNF773Q6PK81 442 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 XKR5Q6UX68 686 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 PLPPR4Q7Z2D5 763 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 SLC22A9Q8IVM8 553 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 CCDC117Q8IWD4 279 aaPredicted RBP5.69□□□□□ -1.5
PHC3-217ENST00000497658 TBC1D21Q8IYX1 336 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 CCDC185Q8N715 623 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 CCNYL1Q8N7R7 359 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 C12orf29Q8N999 325 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 SNX31Q8N9S9 440 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 PAPD5Q8NDF8 572 aaKnown RBP5.69□□□□□ -1.5
PHC3-217ENST00000497658 AGBL3Q8NEM8 1001 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 FLAD1Q8NFF5 587 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 RNF139Q8WU17 664 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 TSPEARQ8WU66 669 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 KCTD4Q8WVF5 259 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 MFSD3Q96ES6 412 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 HSFY1Q96LI6 401 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 ZNF641Q96N77 438 aaPredicted RBP5.69□□□□□ -1.5
PHC3-217ENST00000497658 C8orf37Q96NL8 207 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 GPR78Q96P69 363 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 SLC9A7Q96T83 725 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 BCL7BQ9BQE9 202 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 PSD2Q9BQI7 771 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 MROQ9BYG7 248 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 SEZ6LQ9BYH1 1024 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 WDR12Q9GZL7 423 aaKnown RBP5.69□□□□□ -1.5
PHC3-217ENST00000497658 AS3MTQ9HBK9 375 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 HMG20AQ9NP66 347 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 IARS2Q9NSE4 1012 aaKnown RBP5.69□□□□□ -1.5
PHC3-217ENST00000497658 SETD4Q9NVD3 440 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 INTS10Q9NVR2 710 aaKnown RBP5.69□□□□□ -1.5
PHC3-217ENST00000497658 PIH1D1Q9NWS0 290 aaKnown RBP5.69□□□□□ -1.5
PHC3-217ENST00000497658 TRNAU1APQ9NX07 287 aaKnown RBP5.69□□□□□ -1.5
PHC3-217ENST00000497658 KIAA1522Q9P206 1035 aaPredicted RBP5.69□□□□□ -1.5
PHC3-217ENST00000497658 DOLKQ9UPQ8 538 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 TCAF1Q9Y4C2 921 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 PTPRFP10586 1907 aa5.69□□□□□ -1.5
PHC3-217ENST00000497658 COL11A2P13942 1736 aaPredicted RBP5.69□□□□□ -1.5
PHC3-217ENST00000497658 RBM47A0AV96 593 aaKnown RBP5.68□□□□□ -1.5
PHC3-217ENST00000497658 TYW5A2RUC4 315 aaKnown RBP5.68□□□□□ -1.5
PHC3-217ENST00000497658 C16orf96A6NNT2 1141 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 CLDN25C9JDP6 229 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 ACOX3O15254 700 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 DYNC1LI2O43237 492 aaPredicted RBP5.68□□□□□ -1.5
PHC3-217ENST00000497658 IPO13O94829 963 aaKnown RBP5.68□□□□□ -1.5
PHC3-217ENST00000497658 AHSGP02765 367 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 NTRK1P04629 796 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 RBP1P09455 135 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 ZNF182P17025 639 aaPredicted RBP5.68□□□□□ -1.5
PHC3-217ENST00000497658 UBA1P22314 1058 aaKnown RBP5.68□□□□□ -1.5
PHC3-217ENST00000497658 PTPN3P26045 913 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 EPHX2P34913 555 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 RPS9P46781 194 aaKnown RBP5.68□□□□□ -1.5
PHC3-217ENST00000497658 GLRBP48167 497 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 BCAT1P54687 386 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 IGBP1P78318 339 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 POU4F1Q01851 419 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 OCA2Q04671 838 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 MBTD1Q05BQ5 628 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 ZNF33AQ06730 810 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 TRAF2Q12933 501 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 RALGDSQ12967 914 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 TNFAIP1Q13829 316 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 PRPSAP1Q14558 356 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 ZNF846Q147U1 533 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 AMHR2Q16671 573 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 NDUFA5Q16718 116 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 CYBRD1Q53TN4 286 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 BROXQ5VW32 411 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 OGFOD2Q6N063 350 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 METTL7BQ6UX53 244 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 TMEM26Q6ZUK4 368 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 PTAR1Q7Z6K3 402 aaPredicted RBP5.68□□□□□ -1.5
PHC3-217ENST00000497658 EPHX4Q8IUS5 362 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 SLC15A4Q8N697 577 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 CHST13Q8NET6 341 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 GABPB2Q8TAK5 448 aaPredicted RBP5.68□□□□□ -1.5
PHC3-217ENST00000497658 HMGCLL1Q8TB92 370 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 CYGBQ8WWM9 190 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 S100ZQ8WXG8 99 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 CASP10Q92851 521 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 NT5C3BQ969T7 300 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 ZNF837Q96EG3 531 aaPredicted RBP5.68□□□□□ -1.5
PHC3-217ENST00000497658 MARK4Q96L34 752 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 C12orf42Q96LP6 360 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 PPP1R2P1Q96PQ5 205 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 ASB2Q96Q27 587 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 BDH2Q9BUT1 245 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 YIPF2Q9BWQ6 316 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 B3GNT5Q9BYG0 378 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 GBA3Q9H227 469 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 CHRAC1Q9NRG0 131 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 DPP3Q9NY33 737 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 HOXC10Q9NYD6 342 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 GTSE1Q9NYZ3 720 aa5.68□□□□□ -1.5
PHC3-217ENST00000497658 SEPT10Q9P0V9 454 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms