RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 TXNDC5Q8NBS9 432 aaKnown RBP13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 S100ZQ8WXG8 99 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 C6orf62Q9GZU0 229 aaPredicted RBP13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 AKIP1Q9NQ31 210 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 TMPRSS4Q9NRS4 437 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 ACOT9Q9Y305 439 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 PCDHGA8Q9Y5G5 932 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 ACOX3O15254 700 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 CPNE6O95741 557 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 ARL4AP40617 200 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 LEPRP48357 1165 aaKnown RBP13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 SLC12A2P55011 1212 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 ARPP19P56211 112 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 NCS1P62166 190 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 DGUOKQ16854 277 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 SNAP47Q5SQN1 464 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 KDELC2Q7Z4H8 507 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 LINC00523Q86TU6 105 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 PLD3Q8IV08 490 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 WDR49Q8IV35 697 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 ELMO2Q96JJ3 720 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 QKIQ96PU8 341 aaKnown RBP eCLIP13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 COQ7Q99807 217 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 ALOXE3Q9BYJ1 711 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 IL22Q9GZX6 179 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 ADPRHL2Q9NX46 363 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 ANAPC2Q9UJX6 822 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 ADAM28Q9UKQ2 775 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 GINS2Q9Y248 185 aa13.11□□□□□ -0.31
GAPVD1-220ENST00000497580 LINC00854A0A1B0GVQ3 168 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 RFPL2O75678 378 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 APOA4P06727 396 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 ALOX12P18054 663 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 FSHRP23945 695 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 SERPINB10P48595 397 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 IQCF2Q8IXL9 164 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 C8orf59Q8N0T1 100 aaPredicted RBP13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 C7orf31Q8N865 590 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 TRPV3Q8NET8 790 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 AASSQ9UDR5 926 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 TSPAN16Q9UKR8 245 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 C16orf96A6NNT2 1141 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 PTGER2P43116 358 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 GPD2P43304 727 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 APLP1P51693 650 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 CDH13P55290 713 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 HSDL1Q3SXM5 330 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 DACT2Q5SW24 774 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 ILDR2Q71H61 639 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 DENND6AQ8IWF6 608 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 CSPG4P5Q96PW8 444 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 NAT9Q9BTE0 207 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 LHX5Q9H2C1 402 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 PRDM8Q9NQV8 689 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 RNF19AQ9NV58 838 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 PCDHB3Q9Y5E6 796 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 NRAPQ86VF7 1730 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 FOCADQ5VW36 1801 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 XPNPEP2O43895 674 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 NDUFS2O75306 463 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 PSAPP07602 524 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 NPR1P16066 1061 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 SPNP16150 400 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 CD40LGP29965 261 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 AXLP30530 894 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 NAB1Q13506 487 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 THAP5Q7Z6K1 395 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 CUZD1Q86UP6 607 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 C11orf74Q86VG3 221 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 ATL1Q8WXF7 558 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 SLC10A4Q96EP9 437 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 TMEM176AQ96HP8 235 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 TMEM74Q96NL1 305 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 DEPDC7Q96QD5 511 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 KCTD14Q9BQ13 255 aaPredicted RBP13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 SMURF2Q9HAU4 748 aa13.1□□□□□ -0.31
GAPVD1-220ENST00000497580 KPNA6O60684 536 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 SUPT7LO94864 414 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 ITGB3P05106 788 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 GFAPP14136 432 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 PTPN2P17706 415 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 CXCR2P25025 360 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 NMBRP28336 390 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 DESI1Q6ICB0 168 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 TAF2Q6P1X5 1199 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 CLEC14AQ86T13 490 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 LRRC49Q8IUZ0 686 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 REM2Q8IYK8 340 aaPredicted RBP13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 ABI1Q8IZP0 508 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 ZNF567Q8N184 647 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 RYBPQ8N488 228 aaPredicted RBP13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 CCDC185Q8N715 623 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 KCTD15Q96SI1 283 aaPredicted RBP13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 SH3GL1Q99961 368 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 ZNF670Q9BS34 389 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 REXO4Q9GZR2 422 aaKnown RBP13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 OSBPL2Q9H1P3 480 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 MAGEE1Q9HCI5 957 aa13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 ZNF277Q9NRM2 450 aaPredicted RBP13.09□□□□□ -0.31
GAPVD1-220ENST00000497580 RFC2P35250 354 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms