RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 HEATR9A2RTY3 570 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 LDB2O43679 373 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 RNASEH2AO75792 299 aaKnown RBP18.31■□□□□ 0.52
RGP1-202ENST00000496906 ACADMP11310 421 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 VIPR1P32241 457 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 MAGEA4P43358 317 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 SEMG2Q02383 582 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 CCDC15Q0P6D6 951 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 ELP6Q0PNE2 266 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 RALGDSQ12967 914 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 SEPT6Q14141 434 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 SLMAPQ14BN4 828 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 BRD3Q15059 726 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 TAF1AQ15573 450 aaPredicted RBP18.31■□□□□ 0.52
RGP1-202ENST00000496906 CASC4Q6P4E1 433 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 EMBQ6PCB8 327 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 CRTC1Q6UUV9 634 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 LYSMD3Q7Z3D4 306 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 TMC3Q7Z5M5 1100 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 TSPAN33Q86UF1 283 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 RASSF3Q86WH2 238 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 ANKMY2Q8IV38 441 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 TTC30BQ8N4P2 665 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 STAMBPL1Q96FJ0 436 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 KIFC1Q9BW19 673 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 TXLNGYQ9BZA5 131 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 MRM3Q9HC36 420 aaKnown RBP18.31■□□□□ 0.52
RGP1-202ENST00000496906 CHRAC1Q9NRG0 131 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 SAMD15Q9P1V8 674 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 BCCIPQ9P287 314 aaKnown RBP eCLIP18.31■□□□□ 0.52
RGP1-202ENST00000496906 GGT7Q9UJ14 662 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 FZD4Q9ULV1 537 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 ITM2BQ9Y287 266 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 ARL5AQ9Y689 179 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 MYLKQ15746 1914 aa18.31■□□□□ 0.52
RGP1-202ENST00000496906 C1orf232A0A0U1RR37 186 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 MAGEB16A2A368 324 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 CCDC151A5D8V7 595 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 MROH6A6NGR9 719 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 A8MX80 341 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 SLC7A4O43246 635 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 PAPSS2O95340 614 aaPredicted RBP18.3■□□□□ 0.52
RGP1-202ENST00000496906 APBB3O95704 486 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 CRTAMO95727 393 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 CXCL12P48061 93 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 CCR3P51677 355 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 TAS2R38P59533 333 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 SFSWAPQ12872 951 aaKnown RBP18.3■□□□□ 0.52
RGP1-202ENST00000496906 LRRC66Q68CR7 880 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 KBTBD6Q86V97 674 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 GANCQ8TET4 914 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 PYROXD1Q8WU10 500 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 EID2BQ96D98 161 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 C9orf72Q96LT7 481 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 TRIM56Q9BRZ2 755 aaKnown RBP18.3■□□□□ 0.52
RGP1-202ENST00000496906 NAT9Q9BTE0 207 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 ZFYVE1Q9HBF4 777 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 CD93Q9NPY3 652 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 USP36Q9P275 1121 aaKnown RBP18.3■□□□□ 0.52
RGP1-202ENST00000496906 EBF1Q9UH73 591 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 FADS3Q9Y5Q0 445 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 FAM237BA0A1B0GVD1 139 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 AP1G1O43747 822 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 CLDN7O95471 211 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 ZNF30P17039 623 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 PGAM1P18669 254 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 LAMB3Q13751 1172 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 CNGA3Q16281 694 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 MAP9Q49MG5 647 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 TMEM135Q86UB9 458 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 CCNJLQ8IV13 435 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 PGBD3Q8N328 593 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 CAMKK1Q8N5S9 505 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 CAVIN3Q969G5 261 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 ZNF778Q96MU6 729 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 GPR63Q9BZJ6 419 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 CDC42EP4Q9H3Q1 356 aaKnown RBP18.3■□□□□ 0.52
RGP1-202ENST00000496906 PLAC1Q9HBJ0 212 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 ITM2CQ9NQX7 267 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 ZC3H7BQ9UGR2 993 aaKnown RBP18.3■□□□□ 0.52
RGP1-202ENST00000496906 KCTD3Q9Y597 815 aa18.3■□□□□ 0.52
RGP1-202ENST00000496906 C2orf81A6NN90 581 aa18.29■□□□□ 0.52
RGP1-202ENST00000496906 K7ESF4 209 aa18.29■□□□□ 0.52
RGP1-202ENST00000496906 PLRG1O43660 514 aaKnown RBP18.29■□□□□ 0.52
RGP1-202ENST00000496906 SLC4A1P02730 911 aa18.29■□□□□ 0.52
RGP1-202ENST00000496906 HMGCLP35914 325 aa18.29■□□□□ 0.52
RGP1-202ENST00000496906 TPMTP51580 245 aa18.29■□□□□ 0.52
RGP1-202ENST00000496906 ZNF140P52738 457 aaPredicted RBP18.29■□□□□ 0.52
RGP1-202ENST00000496906 ARHGEF7Q14155 803 aa18.29■□□□□ 0.52
RGP1-202ENST00000496906 TMEM52BQ4KMG9 183 aa18.29■□□□□ 0.52
RGP1-202ENST00000496906 TSTD2Q5T7W7 516 aa18.29■□□□□ 0.52
RGP1-202ENST00000496906 NLRP9Q7RTR0 991 aa18.29■□□□□ 0.52
RGP1-202ENST00000496906 EPHX3Q9H6B9 360 aa18.29■□□□□ 0.52
RGP1-202ENST00000496906 TREX1Q9NSU2 369 aa18.29■□□□□ 0.52
RGP1-202ENST00000496906 NINJ2Q9NZG7 142 aa18.29■□□□□ 0.52
RGP1-202ENST00000496906 RIMKLBQ9ULI2 386 aa18.29■□□□□ 0.52
RGP1-202ENST00000496906 NCKAP1Q9Y2A7 1128 aa18.29■□□□□ 0.52
RGP1-202ENST00000496906 CCDC78A2IDD5 438 aa18.28■□□□□ 0.52
RGP1-202ENST00000496906 H0Y858 1186 aa18.28■□□□□ 0.52
RGP1-202ENST00000496906 BUD23O43709 281 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms