RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 PDX1P52945 283 aa14.32□□□□□ -0.12
VTI1A-209ENST00000496445 TAS2R40P59535 323 aa14.32□□□□□ -0.12
VTI1A-209ENST00000496445 POLR2LP62875 67 aaKnown RBP14.32□□□□□ -0.12
VTI1A-209ENST00000496445 ELOCQ15369 112 aa14.32□□□□□ -0.12
VTI1A-209ENST00000496445 ASTE1Q2TB18 679 aaPredicted RBP14.32□□□□□ -0.12
VTI1A-209ENST00000496445 NCBP2-AS2Q69YL0 99 aa14.32□□□□□ -0.12
VTI1A-209ENST00000496445 ESRP1Q6NXG1 681 aaKnown RBP14.32□□□□□ -0.12
VTI1A-209ENST00000496445 RD3Q7Z3Z2 195 aa14.32□□□□□ -0.12
VTI1A-209ENST00000496445 OR1E3Q8WZA6 343 aa14.32□□□□□ -0.12
VTI1A-209ENST00000496445 COQ10AQ96MF6 247 aa14.32□□□□□ -0.12
VTI1A-209ENST00000496445 ABCG4Q9H172 646 aa14.32□□□□□ -0.12
VTI1A-209ENST00000496445 FGF22Q9HCT0 170 aa14.32□□□□□ -0.12
VTI1A-209ENST00000496445 MRPL40Q9NQ50 206 aaKnown RBP14.32□□□□□ -0.12
VTI1A-209ENST00000496445 USP12O75317 370 aa14.31□□□□□ -0.12
VTI1A-209ENST00000496445 HEXIM1O94992 359 aaKnown RBP14.31□□□□□ -0.12
VTI1A-209ENST00000496445 MPOP05164 745 aa14.31□□□□□ -0.12
VTI1A-209ENST00000496445 TRIM23P36406 574 aa14.31□□□□□ -0.12
VTI1A-209ENST00000496445 SSR1P43307 286 aaKnown RBP14.31□□□□□ -0.12
VTI1A-209ENST00000496445 GABREP78334 506 aa14.31□□□□□ -0.12
VTI1A-209ENST00000496445 GALNT2Q10471 571 aa14.31□□□□□ -0.12
VTI1A-209ENST00000496445 PAFAH1B3Q15102 231 aaKnown RBP14.31□□□□□ -0.12
VTI1A-209ENST00000496445 PTPRRQ15256 657 aa14.31□□□□□ -0.12
VTI1A-209ENST00000496445 SLC18A3Q16572 532 aa14.31□□□□□ -0.12
VTI1A-209ENST00000496445 ISXQ2M1V0 245 aa14.31□□□□□ -0.12
VTI1A-209ENST00000496445 MARC1Q5VT66 337 aa14.31□□□□□ -0.12
VTI1A-209ENST00000496445 TEX26Q8N6G2 289 aa14.31□□□□□ -0.12
VTI1A-209ENST00000496445 PAF1Q8N7H5 531 aa14.31□□□□□ -0.12
VTI1A-209ENST00000496445 ARL10Q8N8L6 244 aa14.31□□□□□ -0.12
VTI1A-209ENST00000496445 PDCD6IPQ8WUM4 868 aaKnown RBP14.31□□□□□ -0.12
VTI1A-209ENST00000496445 GLMNQ92990 594 aa14.31□□□□□ -0.12
VTI1A-209ENST00000496445 NAT6Q93015 286 aa14.31□□□□□ -0.12
VTI1A-209ENST00000496445 MCCC1Q96RQ3 725 aaPredicted RBP14.31□□□□□ -0.12
VTI1A-209ENST00000496445 RBM15Q96T37 977 aaKnown RBP eCLIP14.31□□□□□ -0.12
VTI1A-209ENST00000496445 DNAJC7Q99615 494 aa14.31□□□□□ -0.12
VTI1A-209ENST00000496445 CCDC3Q9BQI4 270 aa14.31□□□□□ -0.12
VTI1A-209ENST00000496445 LGR4Q9BXB1 951 aa14.31□□□□□ -0.12
VTI1A-209ENST00000496445 NT5MQ9NPB1 228 aa14.31□□□□□ -0.12
VTI1A-209ENST00000496445 SIRPGQ9P1W8 387 aa14.31□□□□□ -0.12
VTI1A-209ENST00000496445 CTTNBP2NLQ9P2B4 639 aa14.31□□□□□ -0.12
VTI1A-209ENST00000496445 RABGEF1Q9UJ41 708 aa14.31□□□□□ -0.12
VTI1A-209ENST00000496445 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.31□□□□□ -0.125e-6■■■□□ 17
VTI1A-209ENST00000496445 DGKBQ9Y6T7 804 aa14.31□□□□□ -0.12
VTI1A-209ENST00000496445 ARHGEF17Q96PE2 2063 aaPredicted RBP14.3□□□□□ -0.12
VTI1A-209ENST00000496445 NPIPB15A6NHN6 443 aaPredicted RBP14.3□□□□□ -0.12
VTI1A-209ENST00000496445 CACNB4O00305 520 aaPredicted RBP14.3□□□□□ -0.12
VTI1A-209ENST00000496445 PROSCO94903 275 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 PGLSO95336 258 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 MAP3K6O95382 1288 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 HOXC4P09017 264 aaPredicted RBP14.3□□□□□ -0.12
VTI1A-209ENST00000496445 ALPIP09923 528 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 CTSEP14091 401 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 PTMSP20962 102 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 VIPR1P32241 457 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 GARSP41250 739 aaKnown RBP14.3□□□□□ -0.12
VTI1A-209ENST00000496445 RPIAP49247 311 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 IHHQ14623 411 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 ACOX1Q15067 660 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 HADHQ16836 314 aaKnown RBP14.3□□□□□ -0.12
VTI1A-209ENST00000496445 RALGPS1Q5JS13 557 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 LVRNQ6Q4G3 990 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 RBM44Q6ZP01 1051 aaKnown RBP14.3□□□□□ -0.12
VTI1A-209ENST00000496445 TSPAN33Q86UF1 283 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 CBARPQ8N350 705 aaPredicted RBP14.3□□□□□ -0.12
VTI1A-209ENST00000496445 BBS5Q8N3I7 341 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 OR56A4Q8NGH8 313 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 ATL2Q8NHH9 583 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 LRRN4Q8WUT4 740 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 FGF11Q92914 225 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 FAF2Q96CS3 445 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 NUS1Q96E22 293 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 ATXN7L3BQ96GX2 97 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 ZNF670Q9BS34 389 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 WDR26Q9H7D7 661 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 ASCL3Q9NQ33 180 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 UVRAGQ9P2Y5 699 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 PADI4Q9UM07 663 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 GPR34Q9UPC5 381 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 ENTPD2Q9Y5L3 495 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 SCN8AQ9UQD0 1980 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 BSNQ9UPA5 3926 aa14.3□□□□□ -0.12
VTI1A-209ENST00000496445 A0A0U1RQS6 177 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 A0A1W2PQ67 120 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 PMS2P1A4D2B8 440 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 NTN3O00634 580 aaPredicted RBP14.29□□□□□ -0.12
VTI1A-209ENST00000496445 FZD6O60353 706 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 TCEA3O75764 348 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 DXOO77932 396 aaKnown RBP14.29□□□□□ -0.12
VTI1A-209ENST00000496445 TNFP01375 233 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 PDHA1P08559 390 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 ACTN2P35609 894 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 ETV3P41162 512 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 SOWAHCQ53LP3 525 aaPredicted RBP14.29□□□□□ -0.12
VTI1A-209ENST00000496445 ANKRD20A8PQ5CZ79 823 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 SPECC1LQ69YQ0 1117 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 ALG1LQ6GMV1 187 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 PNCKQ6P2M8 343 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 HSD11B1LQ7Z5J1 315 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 GKN2Q86XP6 184 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 SFTPA2Q8IWL1 248 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 PQLC3Q8N755 202 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms