RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 VEPH1Q14D04 833 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 PPP2R5BQ15173 497 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 GSTA3Q16772 222 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 ASTE1Q2TB18 679 aaPredicted RBP3.86□□□□□ -1.79
CLK1-214ENST00000496205 PRTGQ2VWP7 1150 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 FAM133BQ5BKY9 247 aaKnown RBP3.86□□□□□ -1.79
CLK1-214ENST00000496205 SGO1Q5FBB7 561 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 C6orf10Q5SRN2 563 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 GKAP1Q5VSY0 366 aaPredicted RBP3.86□□□□□ -1.79
CLK1-214ENST00000496205 GFI1BQ5VTD9 330 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 KIAA0930Q6ICG6 404 aaPredicted RBP3.86□□□□□ -1.79
CLK1-214ENST00000496205 LCTLQ6UWM7 567 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 KRT77Q7Z794 578 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 TBC1D26Q86UD7 250 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 ARHGAP12Q8IWW6 846 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 SRBD1Q8N5C6 995 aaKnown RBP3.86□□□□□ -1.79
CLK1-214ENST00000496205 LSMEM1Q8N8F7 131 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 MCPH1Q8NEM0 835 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 GJC3Q8NFK1 279 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 CEP76Q8TAP6 659 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 SCFD2Q8WU76 684 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 ARHGEF2Q92974 986 aaKnown RBP3.86□□□□□ -1.79
CLK1-214ENST00000496205 TIGD1Q96MW7 591 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 MAP7D2Q96T17 732 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 NUDT16L1Q9BRJ7 211 aaKnown RBP3.86□□□□□ -1.79
CLK1-214ENST00000496205 MXRA8Q9BRK3 442 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 MSTO1Q9BUK6 570 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 B3GNT4Q9C0J1 378 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 NPFFR1Q9GZQ6 430 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 SEL1LQ9UBV2 794 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 COG5Q9UP83 839 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 LYVE1Q9Y5Y7 322 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 A3GALT2U3KPV4 340 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 KAT6BQ8WYB5 2073 aa3.86□□□□□ -1.79
CLK1-214ENST00000496205 A0A087WYN8 130 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 LRRC53A6NM62 1247 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 ATP2C2O75185 946 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 NDUFB8O95169 186 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 EPN2O95208 641 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 GABRB1P18505 474 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 CDAP32320 146 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 IFI35P80217 286 aaPredicted RBP3.85□□□□□ -1.79
CLK1-214ENST00000496205 NUCB1Q02818 461 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 RUNX2Q13950 521 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 BECN1Q14457 450 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 DPCR1Q3MIW9 517 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 PRAMEF19Q5SWL8 479 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 C9orf50Q5SZB4 431 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 CAPRIN2Q6IMN6 1127 aaKnown RBP3.85□□□□□ -1.79
CLK1-214ENST00000496205 IGFN1Q86VF2 1251 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 FAM217AQ8IXS0 508 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 DPP10Q8N608 796 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 ENGASEQ8NFI3 743 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 SNAPC3Q92966 411 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 ZKSCAN4Q969J2 545 aaPredicted RBP3.85□□□□□ -1.79
CLK1-214ENST00000496205 CMTM3Q96MX0 182 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 MEIS3Q99687 375 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 SRSF8Q9BRL6 282 aaKnown RBP3.85□□□□□ -1.79
CLK1-214ENST00000496205 POLDIP3Q9BY77 421 aaKnown RBP3.85□□□□□ -1.79
CLK1-214ENST00000496205 CCDC68Q9H2F9 335 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 KLHL31Q9H511 634 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 SYNCQ9H7C4 482 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 RNF146Q9NTX7 359 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 SPATS2LQ9NUQ6 558 aaKnown RBP3.85□□□□□ -1.79
CLK1-214ENST00000496205 NDRG3Q9UGV2 375 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 HAO1Q9UJM8 370 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 CARD8Q9Y2G2 431 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 FAM96BQ9Y3D0 163 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 RAI2Q9Y5P3 530 aa3.85□□□□□ -1.79
CLK1-214ENST00000496205 TRIP12Q14669 1992 aaPredicted RBP3.85□□□□□ -1.79
CLK1-214ENST00000496205 A0A1W2PQ09 198 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 USP17L23D6RBM5 183 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 STMND1H3BQB6 276 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 SEC14L5O43304 696 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 NKX2-2O95096 273 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 MT-CYBP00156 380 aaPredicted RBP3.84□□□□□ -1.79
CLK1-214ENST00000496205 IGKV3-20P01619 116 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 VDRP11473 427 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 HOXB2P14652 356 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 AGAP20933 346 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 RRM1P23921 792 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 MCM3P25205 808 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 RFC1P35251 1148 aaPredicted RBP3.84□□□□□ -1.79
CLK1-214ENST00000496205 PSMB10P40306 273 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 CDH8P55286 799 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 SNX16P57768 344 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 FAM27E3Q08E93 113 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 LPIN1Q14693 890 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 WTAPQ15007 396 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 HIST2H2ACQ16777 129 aaPredicted RBP3.84□□□□□ -1.79
CLK1-214ENST00000496205 SOWAHAQ2M3V2 549 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 C2orf68Q2NKX9 166 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 CDONQ4KMG0 1287 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 RILPL1Q5EBL4 403 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 CES5AQ6NT32 575 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 CHST9Q7L1S5 443 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 CUZD1Q86UP6 607 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 HAPLN4Q86UW8 402 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 NR2C2APQ86WQ0 139 aa3.84□□□□□ -1.79
CLK1-214ENST00000496205 LINC00346Q8IVM7 164 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms