RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 CNTD1Q8N815 330 aa12.42□□□□□ -0.42
MRPL55-233ENST00000495899 TP53I13Q8NBR0 393 aaPredicted RBP12.42□□□□□ -0.42
MRPL55-233ENST00000495899 RHBDD1Q8TEB9 315 aa12.42□□□□□ -0.42
MRPL55-233ENST00000495899 PDCD6IPQ8WUM4 868 aaKnown RBP12.42□□□□□ -0.42
MRPL55-233ENST00000495899 TFB1MQ8WVM0 346 aaKnown RBP12.42□□□□□ -0.42
MRPL55-233ENST00000495899 MCCC1Q96RQ3 725 aaPredicted RBP12.42□□□□□ -0.42
MRPL55-233ENST00000495899 GRPEL1Q9HAV7 217 aa12.42□□□□□ -0.42
MRPL55-233ENST00000495899 AMFRQ9UKV5 643 aa12.42□□□□□ -0.42
MRPL55-233ENST00000495899 PI4KAP42356 2102 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 MED19A0JLT2 244 aaPredicted RBP12.41□□□□□ -0.42
MRPL55-233ENST00000495899 GOLGA6L3A6NEY3 463 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 HACD1B0YJ81 288 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 APOC4-APOC2K7ER74 178 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 PSMD11O00231 422 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 NRDCO43847 1150 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 APOC2P02655 101 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 PRKCGP05129 697 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 ELFN1P0C7U0 828 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 CYP2A6P11509 494 aaPredicted RBP12.41□□□□□ -0.42
MRPL55-233ENST00000495899 EPHA8P29322 1005 aaPredicted RBP12.41□□□□□ -0.42
MRPL55-233ENST00000495899 VIPR1P32241 457 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 DSC2Q02487 901 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 ADCY2Q08462 1091 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 NIPAL4Q0D2K0 466 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 ZBTB17Q13105 803 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 FZD2Q14332 565 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 WSCD2Q2TBF2 565 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 TEX44Q53QW1 395 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 ZNF662Q6ZS27 426 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 PTAR1Q7Z6K3 402 aaPredicted RBP12.41□□□□□ -0.42
MRPL55-233ENST00000495899 RAVER1Q8IY67 606 aaKnown RBP12.41□□□□□ -0.42
MRPL55-233ENST00000495899 BAHD1Q8TBE0 780 aaPredicted RBP12.41□□□□□ -0.42
MRPL55-233ENST00000495899 LRRN4Q8WUT4 740 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 PIH1D2Q8WWB5 315 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 CAMK1GQ96NX5 476 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 VAT1Q99536 393 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 TDRD1Q9BXT4 1180 aaKnown RBP12.41□□□□□ -0.42
MRPL55-233ENST00000495899 OSBPL8Q9BZF1 889 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 MBNL1Q9NR56 388 aaKnown RBP12.41□□□□□ -0.42
MRPL55-233ENST00000495899 SAE1Q9UBE0 346 aaPredicted RBP12.41□□□□□ -0.42
MRPL55-233ENST00000495899 B4GALT6Q9UBX8 382 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 TRIM10Q9UDY6 481 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 DNPEPQ9ULA0 475 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 TTLL3Q9Y4R7 772 aa12.41□□□□□ -0.42
MRPL55-233ENST00000495899 ZNF189O75820 626 aaPredicted RBP12.4□□□□□ -0.42
MRPL55-233ENST00000495899 RECQL5O94762 991 aaPredicted RBP12.4□□□□□ -0.42
MRPL55-233ENST00000495899 HEXIM1O94992 359 aaKnown RBP12.4□□□□□ -0.42
MRPL55-233ENST00000495899 TJP3O95049 919 aa12.4□□□□□ -0.42
MRPL55-233ENST00000495899 CSF2P04141 144 aa12.4□□□□□ -0.42
MRPL55-233ENST00000495899 MMP2P08253 660 aa12.4□□□□□ -0.42
MRPL55-233ENST00000495899 PDHA1P08559 390 aa12.4□□□□□ -0.42
MRPL55-233ENST00000495899 CCDC175P0C221 793 aa12.4□□□□□ -0.42
MRPL55-233ENST00000495899 PECAM1P16284 738 aaPredicted RBP12.4□□□□□ -0.42
MRPL55-233ENST00000495899 IGFALSP35858 605 aa12.4□□□□□ -0.42
MRPL55-233ENST00000495899 THOP1P52888 689 aa12.4□□□□□ -0.42
MRPL55-233ENST00000495899 HNRNPKP61978 463 aaKnown RBP eCLIP12.4□□□□□ -0.42
MRPL55-233ENST00000495899 SIM1P81133 766 aaPredicted RBP12.4□□□□□ -0.42
MRPL55-233ENST00000495899 IL9RQ01113 521 aa12.4□□□□□ -0.42
MRPL55-233ENST00000495899 MTM1Q13496 603 aa12.4□□□□□ -0.42
MRPL55-233ENST00000495899 PDE1CQ14123 709 aaPredicted RBP12.4□□□□□ -0.42
MRPL55-233ENST00000495899 IHHQ14623 411 aa12.4□□□□□ -0.42
MRPL55-233ENST00000495899 SLC14A2Q15849 920 aa12.4□□□□□ -0.42
MRPL55-233ENST00000495899 KANSL1Q7Z3B3 1105 aa12.4□□□□□ -0.42
MRPL55-233ENST00000495899 PARGQ86W56 976 aa12.4□□□□□ -0.42
MRPL55-233ENST00000495899 ALG3Q92685 438 aa12.4□□□□□ -0.42
MRPL55-233ENST00000495899 IMP4Q96G21 291 aaKnown RBP12.4□□□□□ -0.42
MRPL55-233ENST00000495899 TEKT5Q96M29 485 aa12.4□□□□□ -0.42
MRPL55-233ENST00000495899 COQ10AQ96MF6 247 aa12.4□□□□□ -0.42
MRPL55-233ENST00000495899 AGAP3Q96P47 875 aa12.4□□□□□ -0.42
MRPL55-233ENST00000495899 FERMT1Q9BQL6 677 aa12.4□□□□□ -0.42
MRPL55-233ENST00000495899 HEMGNQ9BXL5 484 aa12.4□□□□□ -0.42
MRPL55-233ENST00000495899 ADGRE3Q9BY15 652 aa12.4□□□□□ -0.42
MRPL55-233ENST00000495899 SLC25A51Q9H1U9 297 aa12.4□□□□□ -0.42
MRPL55-233ENST00000495899 PCDH9Q9HC56 1237 aa12.4□□□□□ -0.42
MRPL55-233ENST00000495899 SEPT10Q9P0V9 454 aa12.4□□□□□ -0.42
MRPL55-233ENST00000495899 PLXNA2O75051 1894 aa12.4□□□□□ -0.42
MRPL55-233ENST00000495899 A0A0J9YYE9 177 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 A0A0U1RQJ8 604 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 SPAARA0A1B0GVQ0 90 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 NEMP2A6NFY4 417 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 NPIPB15A6NHN6 443 aaPredicted RBP12.39□□□□□ -0.43
MRPL55-233ENST00000495899 A8MX80 341 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 TNFSF14O43557 240 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 TRIM16O95361 564 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 PRLP01236 227 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 TRBC1P01850 177 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 HOXC4P09017 264 aaPredicted RBP12.39□□□□□ -0.43
MRPL55-233ENST00000495899 PYGMP11217 842 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 NME1P15531 152 aaKnown RBP12.39□□□□□ -0.43
MRPL55-233ENST00000495899 ZNF30P17039 623 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 DGKAP23743 735 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 HTR1BP28222 390 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 HNF1BP35680 557 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 CD86P42081 329 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 EPHB1P54762 984 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 SKOR1P84550 965 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 SEMG2Q02383 582 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 BNIP3Q12983 259 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 ARHGEF7Q14155 803 aa12.39□□□□□ -0.43
MRPL55-233ENST00000495899 INPP5AQ14642 412 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms