RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 J3KR12 359 aa17.61■□□□□ 0.41
TMEM53-209ENST00000495630 FGF10O15520 208 aaPredicted RBP17.61■□□□□ 0.41
TMEM53-209ENST00000495630 PRAMEF11O60813 436 aa17.61■□□□□ 0.41
TMEM53-209ENST00000495630 CCL4P13236 92 aa17.61■□□□□ 0.41
TMEM53-209ENST00000495630 SERPINA4P29622 427 aa17.61■□□□□ 0.41
TMEM53-209ENST00000495630 HTR7P34969 479 aa17.61■□□□□ 0.41
TMEM53-209ENST00000495630 NDST2P52849 883 aa17.61■□□□□ 0.41
TMEM53-209ENST00000495630 HSP90AA4PQ58FG1 418 aa17.61■□□□□ 0.41
TMEM53-209ENST00000495630 PNCKQ6P2M8 343 aa17.61■□□□□ 0.41
TMEM53-209ENST00000495630 ZNF438Q7Z4V0 828 aa17.61■□□□□ 0.41
TMEM53-209ENST00000495630 CCL4L1Q8NHW4 92 aa17.61■□□□□ 0.41
TMEM53-209ENST00000495630 GPBAR1Q8TDU6 330 aa17.61■□□□□ 0.41
TMEM53-209ENST00000495630 NKD1Q969G9 470 aa17.61■□□□□ 0.41
TMEM53-209ENST00000495630 ECHDC3Q96DC8 303 aa17.61■□□□□ 0.41
TMEM53-209ENST00000495630 LRRC19Q9H756 370 aa17.61■□□□□ 0.41
TMEM53-209ENST00000495630 RDH14Q9HBH5 336 aa17.61■□□□□ 0.41
TMEM53-209ENST00000495630 PCDHGA3Q9Y5H0 932 aa17.61■□□□□ 0.41
TMEM53-209ENST00000495630 COL12A1Q99715 3063 aa17.6■□□□□ 0.41
TMEM53-209ENST00000495630 RHPN2P1A8MT19 583 aa17.6■□□□□ 0.41
TMEM53-209ENST00000495630 PRKCGP05129 697 aa17.6■□□□□ 0.41
TMEM53-209ENST00000495630 FGF1P05230 155 aa17.6■□□□□ 0.41
TMEM53-209ENST00000495630 ELFN1P0C7U0 828 aa17.6■□□□□ 0.41
TMEM53-209ENST00000495630 CCNB1P14635 433 aa17.6■□□□□ 0.41
TMEM53-209ENST00000495630 ALDH4A1P30038 563 aa17.6■□□□□ 0.41
TMEM53-209ENST00000495630 SOX5P35711 763 aa17.6■□□□□ 0.41
TMEM53-209ENST00000495630 GPR3P46089 330 aa17.6■□□□□ 0.41
TMEM53-209ENST00000495630 NSFP46459 744 aaKnown RBP17.6■□□□□ 0.41
TMEM53-209ENST00000495630 ATP1A2P50993 1020 aa17.6■□□□□ 0.41
TMEM53-209ENST00000495630 ZNF143P52747 638 aaPredicted RBP17.6■□□□□ 0.41
TMEM53-209ENST00000495630 OR1D5P58170 312 aa17.6■□□□□ 0.41
TMEM53-209ENST00000495630 TLE1Q04724 770 aa17.6■□□□□ 0.41
TMEM53-209ENST00000495630 NSUN2Q08J23 767 aaKnown RBP eCLIP17.6■□□□□ 0.41
TMEM53-209ENST00000495630 RALGDSQ12967 914 aa17.6■□□□□ 0.41
TMEM53-209ENST00000495630 TRA2AQ13595 282 aaKnown RBP eCLIP17.6■□□□□ 0.41
TMEM53-209ENST00000495630 NR1D2Q14995 579 aa17.6■□□□□ 0.41
TMEM53-209ENST00000495630 AMZ1Q400G9 498 aa17.6■□□□□ 0.41
TMEM53-209ENST00000495630 BORAQ6PGQ7 559 aa17.6■□□□□ 0.41
TMEM53-209ENST00000495630 PHF13Q86YI8 300 aaPredicted RBP17.6■□□□□ 0.41
TMEM53-209ENST00000495630 C3orf20Q8ND61 904 aa17.6■□□□□ 0.41
TMEM53-209ENST00000495630 LGR4Q9BXB1 951 aa17.6■□□□□ 0.41
TMEM53-209ENST00000495630 CDH19Q9H159 772 aa17.6■□□□□ 0.41
TMEM53-209ENST00000495630 GANQ9H2C0 597 aa17.6■□□□□ 0.41
TMEM53-209ENST00000495630 WDR26Q9H7D7 661 aa17.6■□□□□ 0.41
TMEM53-209ENST00000495630 SPATS2LQ9NUQ6 558 aaKnown RBP17.6■□□□□ 0.41
TMEM53-209ENST00000495630 MOSPD1Q9UJG1 213 aa17.6■□□□□ 0.41
TMEM53-209ENST00000495630 SCN8AQ9UQD0 1980 aa17.6■□□□□ 0.41
TMEM53-209ENST00000495630 PRSS38A1L453 326 aa17.59■□□□□ 0.41
TMEM53-209ENST00000495630 PALMO75781 387 aa17.59■□□□□ 0.41
TMEM53-209ENST00000495630 CALB1P05937 261 aa17.59■□□□□ 0.41
TMEM53-209ENST00000495630 FGF3P11487 239 aaPredicted RBP17.59■□□□□ 0.41
TMEM53-209ENST00000495630 CD1CP29017 333 aa17.59■□□□□ 0.41
TMEM53-209ENST00000495630 UBE2HP62256 183 aa17.59■□□□□ 0.41
TMEM53-209ENST00000495630 BCL2L1Q07817 233 aa17.59■□□□□ 0.41
TMEM53-209ENST00000495630 SQSTM1Q13501 440 aa17.59■□□□□ 0.41
TMEM53-209ENST00000495630 TCP11X2Q5H9J9 407 aa17.59■□□□□ 0.41
TMEM53-209ENST00000495630 DPPA4Q7L190 304 aa17.59■□□□□ 0.41
TMEM53-209ENST00000495630 TSEN2Q8NCE0 465 aaKnown RBP17.59■□□□□ 0.41
TMEM53-209ENST00000495630 ZDHHC1Q8WTX9 485 aa17.59■□□□□ 0.41
TMEM53-209ENST00000495630 PCDHB18PQ96TA0 734 aa17.59■□□□□ 0.41
TMEM53-209ENST00000495630 KCTD5Q9NXV2 234 aa17.59■□□□□ 0.41
TMEM53-209ENST00000495630 DACH1Q9UI36 760 aa17.59■□□□□ 0.41
TMEM53-209ENST00000495630 TUBD1Q9UJT1 453 aa17.59■□□□□ 0.41
TMEM53-209ENST00000495630 PTPN13Q12923 2485 aa17.58■□□□□ 0.41
TMEM53-209ENST00000495630 IGHV5-10-1A0A0J9YXX1 117 aa17.58■□□□□ 0.4
TMEM53-209ENST00000495630 ANKRD62A6NC57 917 aa17.58■□□□□ 0.4
TMEM53-209ENST00000495630 ARHGAP42A6NI28 874 aa17.58■□□□□ 0.4
TMEM53-209ENST00000495630 TEX33O43247 280 aa17.58■□□□□ 0.4
TMEM53-209ENST00000495630 CCP110O43303 1012 aa17.58■□□□□ 0.4
TMEM53-209ENST00000495630 GM2AP17900 193 aa17.58■□□□□ 0.4
TMEM53-209ENST00000495630 EEF1GP26641 437 aaKnown RBP17.58■□□□□ 0.4
TMEM53-209ENST00000495630 RGRP47804 291 aa17.58■□□□□ 0.4
TMEM53-209ENST00000495630 PAPOLAP51003 745 aaKnown RBP17.58■□□□□ 0.4
TMEM53-209ENST00000495630 LIMK2P53671 638 aa17.58■□□□□ 0.4
TMEM53-209ENST00000495630 MAZP56270 477 aaKnown RBP17.58■□□□□ 0.4
TMEM53-209ENST00000495630 JAM2P57087 298 aa17.58■□□□□ 0.4
TMEM53-209ENST00000495630 POLR2FP61218 127 aaKnown RBP17.58■□□□□ 0.4
TMEM53-209ENST00000495630 ILF3Q12906 894 aaKnown RBP eCLIP17.58■□□□□ 0.4
TMEM53-209ENST00000495630 PEX6Q13608 980 aa17.58■□□□□ 0.4
TMEM53-209ENST00000495630 NRROSQ86YC3 692 aa17.58■□□□□ 0.4
TMEM53-209ENST00000495630 ZNF564Q8TBZ8 553 aaPredicted RBP17.58■□□□□ 0.4
TMEM53-209ENST00000495630 JPH3Q8WXH2 748 aaPredicted RBP17.58■□□□□ 0.4
TMEM53-209ENST00000495630 NUDT22Q9BRQ3 303 aa17.58■□□□□ 0.4
TMEM53-209ENST00000495630 CNPY3Q9BT09 278 aa17.58■□□□□ 0.4
TMEM53-209ENST00000495630 GSDMCQ9BYG8 508 aa17.58■□□□□ 0.4
TMEM53-209ENST00000495630 SLC39A8Q9C0K1 460 aa17.58■□□□□ 0.4
TMEM53-209ENST00000495630 SAMSN1Q9NSI8 373 aaKnown RBP17.58■□□□□ 0.4
TMEM53-209ENST00000495630 TRNAU1APQ9NX07 287 aaKnown RBP17.58■□□□□ 0.4
TMEM53-209ENST00000495630 TRAFD1O14545 582 aaPredicted RBP17.57■□□□□ 0.4
TMEM53-209ENST00000495630 MYCLP1P12525 358 aaPredicted RBP17.57■□□□□ 0.4
TMEM53-209ENST00000495630 ARSDP51689 593 aa17.57■□□□□ 0.4
TMEM53-209ENST00000495630 TPI1P60174 286 aa17.57■□□□□ 0.4
TMEM53-209ENST00000495630 RFTN1Q14699 578 aaPredicted RBP17.57■□□□□ 0.4
TMEM53-209ENST00000495630 ACOX1Q15067 660 aa17.57■□□□□ 0.4
TMEM53-209ENST00000495630 CLEC16AQ2KHT3 1053 aa17.57■□□□□ 0.4
TMEM53-209ENST00000495630 CT47A1Q5JQC4 288 aaPredicted RBP17.57■□□□□ 0.4
TMEM53-209ENST00000495630 IL22RA1Q8N6P7 574 aa17.57■□□□□ 0.4
TMEM53-209ENST00000495630 PAF1Q8N7H5 531 aa17.57■□□□□ 0.4
TMEM53-209ENST00000495630 AGBL5Q8NDL9 886 aa17.57■□□□□ 0.4
TMEM53-209ENST00000495630 RCBTB1Q8NDN9 531 aa17.57■□□□□ 0.4
TMEM53-209ENST00000495630 CCDC112Q8NEF3 446 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms