RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 F5P12259 2224 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 KANSL1LA0AUZ9 987 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 NPIPB15A6NHN6 443 aaPredicted RBP12.13□□□□□ -0.47
BRD3-206ENST00000494743 C16orf96A6NNT2 1141 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 UPK3BL1B0FP48 263 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 UPK3BL2E5RIL1 263 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 C1QTNF3-AMACRE9PGA6 284 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 SPINT1O43278 529 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 SYNCRIPO60506 623 aaKnown RBP12.13□□□□□ -0.47
BRD3-206ENST00000494743 SHBGP04278 402 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 HOXB2P14652 356 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 TIMP2P16035 220 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 CTPS1P17812 591 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 NMBRP28336 390 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 HNF1BP35680 557 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 ABL2P42684 1182 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 ZNF140P52738 457 aaPredicted RBP12.13□□□□□ -0.47
BRD3-206ENST00000494743 POLR2LP62875 67 aaKnown RBP12.13□□□□□ -0.47
BRD3-206ENST00000494743 LAMB3Q13751 1172 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 SEPT6Q14141 434 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 STARD3Q14849 445 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 TAF1AQ15573 450 aaPredicted RBP12.13□□□□□ -0.47
BRD3-206ENST00000494743 SPANXN3Q5MJ09 141 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 CFAP58Q5T655 872 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 TSTD2Q5T7W7 516 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 SDE2Q6IQ49 451 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 TRMT10BQ6PF06 316 aaKnown RBP12.13□□□□□ -0.47
BRD3-206ENST00000494743 CES3Q6UWW8 571 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 Q6ZS52 159 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 CAPN12Q6ZSI9 719 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 USP45Q70EL2 814 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 NLRP9Q7RTR0 991 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 HDXQ7Z353 690 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 GLT6D1Q7Z4J2 308 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 MMAAQ8IVH4 418 aaKnown RBP12.13□□□□□ -0.47
BRD3-206ENST00000494743 SIX5Q8N196 739 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 SYNPOQ8N3V7 929 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 OR13J1Q8NGT2 312 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 GSDMBQ8TAX9 411 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 EDAQ92838 391 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 EID2BQ96D98 161 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 PPP1R16AQ96I34 528 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 SHDQ96IW2 340 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 SRPK1Q96SB4 655 aaKnown RBP12.13□□□□□ -0.47
BRD3-206ENST00000494743 IRF2BPLQ9H1B7 796 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 VIPAS39Q9H9C1 493 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 VPS37BQ9H9H4 285 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 SLC2A6Q9UGQ3 507 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 FBXL21Q9UKT6 434 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 MMP17Q9ULZ9 603 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 MRPS17Q9Y2R5 130 aaKnown RBP12.13□□□□□ -0.47
BRD3-206ENST00000494743 ZNF711Q9Y462 761 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 MTF2Q9Y483 593 aaPredicted RBP12.13□□□□□ -0.47
BRD3-206ENST00000494743 ARL5AQ9Y689 179 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 FAM169AQ9Y6X4 670 aa12.13□□□□□ -0.47
BRD3-206ENST00000494743 MYO18AQ92614 2054 aaKnown RBP12.13□□□□□ -0.47
BRD3-206ENST00000494743 BAHCC1Q9P281 2608 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 A0A087WUV0 522 aaPredicted RBP12.12□□□□□ -0.47
BRD3-206ENST00000494743 A0A0U1RQS6 177 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 TMEM221A6NGB7 291 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 CHURC1-FNTBB4DL54 471 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 M0R296 226 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 KPNA3O00505 521 aaPredicted RBP12.12□□□□□ -0.47
BRD3-206ENST00000494743 CRTAMO95727 393 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 IL1BP01584 269 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 LHCGRP22888 699 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 ARNTP27540 789 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 STX2P32856 288 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 PHBP35232 272 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 DRD3P35462 400 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 HMGCLP35914 325 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 ARCN1P48444 511 aaKnown RBP12.12□□□□□ -0.47
BRD3-206ENST00000494743 PSMD8P48556 350 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 SATB1Q01826 763 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 LRRC32Q14392 662 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 CST6Q15828 149 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 CNGA3Q16281 694 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 POM121L1PQ3SYA9 428 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 LRRC73Q5JTD7 316 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 EOGTQ5NDL2 527 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 KIAA0930Q6ICG6 404 aaPredicted RBP12.12□□□□□ -0.47
BRD3-206ENST00000494743 ESRP1Q6NXG1 681 aaKnown RBP12.12□□□□□ -0.47
BRD3-206ENST00000494743 ZNF449Q6P9G9 518 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 CRTC1Q6UUV9 634 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 LRIG3Q6UXM1 1119 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 TRIM67Q6ZTA4 783 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 ASCL5Q7RTU5 278 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 LYSMD3Q7Z3D4 306 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 TSPAN33Q86UF1 283 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 UNC5BQ8IZJ1 945 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.12□□□□□ -0.47
BRD3-206ENST00000494743 OR2W6PQ8NHA6 318 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 UHMK1Q8TAS1 419 aaKnown RBP12.12□□□□□ -0.47
BRD3-206ENST00000494743 FBF1Q8TES7 1133 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 FAM131CQ96AQ9 280 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 ZNF669Q96BR6 464 aaPredicted RBP12.12□□□□□ -0.47
BRD3-206ENST00000494743 ERLEC1Q96DZ1 483 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 ZIM3Q96PE6 472 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 C19orf43Q9BQ61 176 aa12.12□□□□□ -0.47
BRD3-206ENST00000494743 HDAC8Q9BY41 377 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms