RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 MTMR11A4FU01 709 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 OR6C75A6NL08 312 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 UBFD1O14562 309 aaKnown RBP11.23□□□□□ -0.61
CHMP3-209ENST00000494623 UBDO15205 165 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 TLR5O60602 858 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 ATP6AP2O75787 350 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 HDCP19113 662 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 IMPDH1P20839 514 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 TACR2P21452 398 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 ALDH1A3P47895 512 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 MRPL58Q14197 206 aaKnown RBP11.23□□□□□ -0.61
CHMP3-209ENST00000494623 SEMA3AQ14563 771 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 SLC14A2Q15849 920 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 AGKQ53H12 422 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 ZNF549Q6P9A3 640 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 EGFL6Q8IUX8 553 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 SLC22A9Q8IVM8 553 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 BHLHE22Q8NFJ8 381 aaPredicted RBP11.23□□□□□ -0.61
CHMP3-209ENST00000494623 TADA1Q96BN2 335 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 FAR2Q96K12 515 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 PSMD13Q9UNM6 376 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 PRAMEF11O60813 436 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 SMIM24O75264 130 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 SNUPNO95149 360 aaKnown RBP11.23□□□□□ -0.61
CHMP3-209ENST00000494623 PRSS56P0CW18 603 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 UQCRBP14927 111 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 VCLP18206 1134 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 YBEYP58557 167 aaPredicted RBP11.23□□□□□ -0.61
CHMP3-209ENST00000494623 MED21Q13503 144 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 FAM45BPQ6NSW5 357 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 PELI3Q8N2H9 469 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 PQLC1Q8N2U9 271 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 FAM45AQ8TCE6 357 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 PTERQ96BW5 349 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 GSTO2Q9H4Y5 243 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 ZDHHC7Q9NXF8 308 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 PCDHB7Q9Y5E2 793 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 MIA3Q5JRA6 1907 aa11.23□□□□□ -0.61
CHMP3-209ENST00000494623 CCDC189A1A4V9 331 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 CAPN8A6NHC0 703 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 ENO4A6NNW6 628 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 F5H5T6 163 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 PSMD12O00232 456 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-209ENST00000494623 VNN2O95498 520 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 PMLP29590 882 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 CCNHP51946 323 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-209ENST00000494623 FASTKQ14296 549 aaKnown RBP11.22□□□□□ -0.61
CHMP3-209ENST00000494623 RTP2Q5QGT7 225 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 ZNF678Q5SXM1 525 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 TAS1R1Q7RTX1 841 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 ICA1LQ8NDH6 482 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 OR7D4Q8NG98 312 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 STON2Q8WXE9 905 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 LRGUKQ96M69 825 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 GCNAQ96QF7 691 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 NACA2Q9H009 215 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.22□□□□□ -0.61
CHMP3-209ENST00000494623 COPS7BQ9H9Q2 264 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-209ENST00000494623 MEAF6Q9HAF1 191 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 TMEM161AQ9NX61 479 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 VPS28Q9UK41 221 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 IGLV3-27P01718 113 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 SLC11A1P49279 550 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 SATB1Q01826 763 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 GPR17Q13304 367 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 PDAP1Q13442 181 aaKnown RBP11.22□□□□□ -0.61
CHMP3-209ENST00000494623 UNC50Q53HI1 259 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 MRNIPQ6NTE8 343 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 LAYNQ6UX15 382 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 CHSY3Q70JA7 882 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 OR4L1Q8NH43 312 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 HMGCLL1Q8TB92 370 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 BRSK1Q8TDC3 778 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 FEM1CQ96JP0 617 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 FBRSL1Q9HCM7 1045 aaKnown RBP11.22□□□□□ -0.61
CHMP3-209ENST00000494623 DTNAQ9Y4J8 743 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 DOCK4Q8N1I0 1966 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 LRRC14BA6NHZ5 514 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 PPP6CO00743 305 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 ENPP3O14638 875 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 CASQ2O14958 399 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-209ENST00000494623 RPP40O75818 363 aaKnown RBP11.22□□□□□ -0.61
CHMP3-209ENST00000494623 SIX3O95343 332 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-209ENST00000494623 FGF1P05230 155 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 SERPINF2P08697 491 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 CD1DP15813 335 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 HLA-DPA1P20036 260 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 FGFR3P22607 806 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 SLC6A4P31645 630 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 MAPKAPK2P49137 400 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 PSME3P61289 254 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 TIAL1Q01085 375 aaKnown RBP eCLIP11.22□□□□□ -0.61
CHMP3-209ENST00000494623 STX5Q13190 355 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 PTK2BQ14289 1009 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 PRSS55Q6UWB4 352 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-209ENST00000494623 GALNT7Q86SF2 657 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 SPATA24Q86W54 205 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 DBF4BQ8NFT6 615 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 EXOC2Q96KP1 924 aa11.22□□□□□ -0.61
CHMP3-209ENST00000494623 GBP5Q96PP8 586 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 176.5 ms