RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 RBM41Q96IZ5 413 aaKnown RBP8.83□□□□□ -1
ITGB1-217ENST00000494395 FEM1CQ96JP0 617 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 LENG8Q96PV6 779 aaPredicted RBP8.83□□□□□ -1
ITGB1-217ENST00000494395 KLF6Q99612 283 aaPredicted RBP8.83□□□□□ -1
ITGB1-217ENST00000494395 SLC17A9Q9BYT1 436 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 IL21RQ9HBE5 538 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 NT5MQ9NPB1 228 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 FZD3Q9NPG1 666 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 PCDH12Q9NPG4 1184 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 SAE1Q9UBE0 346 aaPredicted RBP8.83□□□□□ -1
ITGB1-217ENST00000494395 CA5BQ9Y2D0 317 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 EFR3BQ9Y2G0 817 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 FNDC3AQ9Y2H6 1198 aaKnown RBP8.83□□□□□ -1
ITGB1-217ENST00000494395 PPIL1Q9Y3C6 166 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 PCDHGC4Q9Y5F7 938 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 HEY1Q9Y5J3 304 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 SNX11Q9Y5W9 270 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 LRP4O75096 1905 aa8.83□□□□□ -1
ITGB1-217ENST00000494395 DCDC2BA2VCK2 349 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 GOLGA6L3A6NEY3 463 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 IGLON5A6NGN9 336 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 H0Y8X5 98 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 KCNK1O00180 336 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 RAD51BO15315 384 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 SLC31A1O15431 190 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 DDX3YO15523 660 aaKnown RBP8.82□□□□□ -1
ITGB1-217ENST00000494395 FZD6O60353 706 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 CER1O95813 267 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 PRLP01236 227 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 MMP2P08253 660 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 GM2AP17900 193 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 TGM2P21980 687 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 NR2C2P49116 596 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 DYNLT1P63172 113 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 DSC2Q02487 901 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 NIPAL4Q0D2K0 466 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 ELP6Q0PNE2 266 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 OVGP1Q12889 678 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 RALGDSQ12967 914 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 TFDP2Q14188 446 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 PDK1Q15118 436 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 LLGL1Q15334 1064 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 SHBQ15464 509 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 HLA-BQ31612 363 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 FAM182AQ5T1J6 154 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 AADACL2Q6P093 401 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 IL27RAQ6UWB1 636 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 PRICKLE2Q7Z3G6 844 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 BBS5Q8N3I7 341 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 TXLNBQ8N3L3 684 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 RNF10Q8N5U6 811 aaKnown RBP8.82□□□□□ -1
ITGB1-217ENST00000494395 DENND6BQ8NEG7 585 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 RNF217Q8TC41 542 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.82□□□□□ -1
ITGB1-217ENST00000494395 NSMCE1Q8WV22 266 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 TADA1Q96BN2 335 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 CENPTQ96BT3 561 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 HES6Q96HZ4 224 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 BMFQ96LC9 184 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 ZNF830Q96NB3 372 aaPredicted RBP8.82□□□□□ -1
ITGB1-217ENST00000494395 GTPBP2Q9BX10 602 aaKnown RBP8.82□□□□□ -1
ITGB1-217ENST00000494395 POLR1EQ9GZS1 481 aaKnown RBP8.82□□□□□ -1
ITGB1-217ENST00000494395 BRD8Q9H0E9 1235 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 GAREM1Q9H706 876 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 AASDHPPTQ9NRN7 309 aa8.82□□□□□ -1
ITGB1-217ENST00000494395 RBM22Q9NW64 420 aaKnown RBP eCLIP8.82□□□□□ -1
ITGB1-217ENST00000494395 PACSIN2Q9UNF0 486 aaPredicted RBP8.82□□□□□ -1
ITGB1-217ENST00000494395 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.82□□□□□ -1
ITGB1-217ENST00000494395 COL5A1P20908 1838 aaPredicted RBP8.82□□□□□ -1
ITGB1-217ENST00000494395 ARID1BQ8NFD5 2236 aaPredicted RBP8.81□□□□□ -1
ITGB1-217ENST00000494395 CACNA1AO00555 2505 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 CFAP69A5D8W1 941 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 POM121BA6NF01 834 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 TLR4O00206 839 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 PPP1R12AO14974 1030 aaPredicted RBP8.81□□□□□ -1
ITGB1-217ENST00000494395 KRT86O43790 486 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 MMP20O60882 483 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 OPHN1O60890 802 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 PGLSO95336 258 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 FTCDO95954 541 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 PAK4O96013 591 aaPredicted RBP8.81□□□□□ -1
ITGB1-217ENST00000494395 JCHAINP01591 159 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 PRKCGP05129 697 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 PDHA1P08559 390 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 PYGMP11217 842 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 CSRP1P21291 193 aaKnown RBP8.81□□□□□ -1
ITGB1-217ENST00000494395 MAPK1P28482 360 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 AKT2P31751 481 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 IGFALSP35858 605 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 RWDD2BP57060 319 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 CLDN2P57739 230 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 NXPH1P58417 271 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 PFN3P60673 137 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 SLC14A1Q13336 389 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 NOMO1Q15155 1222 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 KAZNQ674X7 775 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 LIPIQ6XZB0 460 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 KYAT3Q6YP21 454 aaKnown RBP8.81□□□□□ -1
ITGB1-217ENST00000494395 B4GALNT4Q76KP1 1039 aa8.81□□□□□ -1
ITGB1-217ENST00000494395 DPPA4Q7L190 304 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms