RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 MAGEC1O60732 1142 aa12.51□□□□□ -0.41
TRA2A-209ENST00000494255 HEXIM1O94992 359 aaKnown RBP12.51□□□□□ -0.41
TRA2A-209ENST00000494255 ZNF30P17039 623 aa12.51□□□□□ -0.41
TRA2A-209ENST00000494255 TGM1P22735 817 aa12.51□□□□□ -0.41
TRA2A-209ENST00000494255 HNF1BP35680 557 aa12.51□□□□□ -0.41
TRA2A-209ENST00000494255 ATXN3P54252 364 aaPredicted RBP12.51□□□□□ -0.41
TRA2A-209ENST00000494255 GDF10P55107 478 aa12.51□□□□□ -0.41
TRA2A-209ENST00000494255 OVGP1Q12889 678 aa12.51□□□□□ -0.41
TRA2A-209ENST00000494255 ACOX1Q15067 660 aa12.51□□□□□ -0.41
TRA2A-209ENST00000494255 QPCTQ16769 361 aa12.51□□□□□ -0.41
TRA2A-209ENST00000494255 PARP6Q2NL67 630 aa12.51□□□□□ -0.41
TRA2A-209ENST00000494255 P3H1Q32P28 736 aa12.51□□□□□ -0.41
TRA2A-209ENST00000494255 PAPD7Q5XG87 772 aaKnown RBP12.51□□□□□ -0.41
TRA2A-209ENST00000494255 DENND2CQ68D51 928 aa12.51□□□□□ -0.41
TRA2A-209ENST00000494255 KDELC1Q6UW63 502 aa12.51□□□□□ -0.41
TRA2A-209ENST00000494255 GSTA5Q7RTV2 222 aa12.51□□□□□ -0.41
TRA2A-209ENST00000494255 IQCHQ86VS3 1027 aa12.51□□□□□ -0.41
TRA2A-209ENST00000494255 IPMKQ8NFU5 416 aa12.51□□□□□ -0.41
TRA2A-209ENST00000494255 ACTRT1Q8TDG2 376 aa12.51□□□□□ -0.41
TRA2A-209ENST00000494255 RTP4Q96DX8 246 aa12.51□□□□□ -0.41
TRA2A-209ENST00000494255 SRPK1Q96SB4 655 aaKnown RBP12.51□□□□□ -0.41
TRA2A-209ENST00000494255 EDEM2Q9BV94 578 aa12.51□□□□□ -0.41
TRA2A-209ENST00000494255 KCTD5Q9NXV2 234 aa12.51□□□□□ -0.41
TRA2A-209ENST00000494255 DRG1Q9Y295 367 aaKnown RBP12.51□□□□□ -0.41
TRA2A-209ENST00000494255 HS3ST3A1Q9Y663 406 aa12.51□□□□□ -0.41
TRA2A-209ENST00000494255 SAR1BQ9Y6B6 198 aa12.51□□□□□ -0.41
TRA2A-209ENST00000494255 LRRK1Q38SD2 2015 aa12.5□□□□□ -0.41
TRA2A-209ENST00000494255 A0A1W2PR77 199 aa12.5□□□□□ -0.41
TRA2A-209ENST00000494255 LNP1A1A4G5 178 aa12.5□□□□□ -0.41
TRA2A-209ENST00000494255 A6NNZ2 444 aa12.5□□□□□ -0.41
TRA2A-209ENST00000494255 PSMD11O00231 422 aa12.5□□□□□ -0.41
TRA2A-209ENST00000494255 ARHGAP33O14559 1287 aa12.5□□□□□ -0.41
TRA2A-209ENST00000494255 WNT9AO14904 365 aa12.5□□□□□ -0.41
TRA2A-209ENST00000494255 EPOP01588 193 aa12.5□□□□□ -0.41
TRA2A-209ENST00000494255 ENGP17813 658 aa12.5□□□□□ -0.41
TRA2A-209ENST00000494255 CASQ1P31415 396 aa12.5□□□□□ -0.41
TRA2A-209ENST00000494255 LRRC14Q15048 493 aa12.5□□□□□ -0.41
TRA2A-209ENST00000494255 CNGA3Q16281 694 aa12.5□□□□□ -0.41
TRA2A-209ENST00000494255 CRTC1Q6UUV9 634 aa12.5□□□□□ -0.41
TRA2A-209ENST00000494255 IL27RAQ6UWB1 636 aa12.5□□□□□ -0.41
TRA2A-209ENST00000494255 LAYNQ6UX15 382 aa12.5□□□□□ -0.41
TRA2A-209ENST00000494255 PTAR1Q7Z6K3 402 aaPredicted RBP12.5□□□□□ -0.41
TRA2A-209ENST00000494255 PRELID2Q8N945 189 aa12.5□□□□□ -0.41
TRA2A-209ENST00000494255 TMEM145Q8NBT3 493 aa12.5□□□□□ -0.41
TRA2A-209ENST00000494255 KLHDC7BQ96G42 594 aa12.5□□□□□ -0.41
TRA2A-209ENST00000494255 GTPBP2Q9BX10 602 aaKnown RBP12.5□□□□□ -0.41
TRA2A-209ENST00000494255 AP1M1Q9BXS5 423 aa12.5□□□□□ -0.41
TRA2A-209ENST00000494255 FSCN3Q9NQT6 498 aa12.5□□□□□ -0.41
TRA2A-209ENST00000494255 CA5BQ9Y2D0 317 aa12.5□□□□□ -0.41
TRA2A-209ENST00000494255 ANKRD6Q9Y2G4 727 aa12.5□□□□□ -0.41
TRA2A-209ENST00000494255 C1orf232A0A0U1RR37 186 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 LOC285095A0A1B0GVY8 99 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 ZNF185O15231 689 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 RAD51BO15315 384 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 PSMD3O43242 534 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 RECQL5O94762 991 aaPredicted RBP12.49□□□□□ -0.41
TRA2A-209ENST00000494255 WNT1P04628 370 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 HLA-DPA1P20036 260 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 LHCGRP22888 699 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 FDFT1P37268 417 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 CLDN2P57739 230 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 ETF1P62495 437 aaKnown RBP12.49□□□□□ -0.41
TRA2A-209ENST00000494255 GRIK2Q13002 908 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 AGERQ15109 404 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 PTPRRQ15256 657 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 LRRC66Q68CR7 880 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 GCNT7Q6ZNI0 430 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 TSPAN33Q86UF1 283 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 TP53I13Q8NBR0 393 aaPredicted RBP12.49□□□□□ -0.41
TRA2A-209ENST00000494255 CCHCR1Q8TD31 782 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 MAGOHBQ96A72 148 aaKnown RBP12.49□□□□□ -0.41
TRA2A-209ENST00000494255 CENPTQ96BT3 561 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 MRGPRX2Q96LB1 330 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 COQ10AQ96MF6 247 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 LYSMD1Q96S90 227 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 KLF6Q99612 283 aaPredicted RBP12.49□□□□□ -0.41
TRA2A-209ENST00000494255 FICDQ9BVA6 458 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 SMARCAL1Q9NZC9 954 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 PAK5Q9P286 719 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 ADAMTS9Q9P2N4 1935 aa12.49□□□□□ -0.41
TRA2A-209ENST00000494255 ZFHX2Q9C0A1 2572 aaPredicted RBP12.49□□□□□ -0.41
TRA2A-209ENST00000494255 GOLGA8CPA6NN73 597 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 TLR4O00206 839 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 CER1O95813 267 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 FGF1P05230 155 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 THEGLP0DJG4 465 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 KCNJ1P48048 391 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 ARHGAP8P85298 464 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 IRF4Q15306 451 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 SLC1A5Q15758 541 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 KIF19Q2TAC6 998 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 WSCD2Q2TBF2 565 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 SIRPB2Q5JXA9 342 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 C4orf22Q6V702 233 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 KYAT3Q6YP21 454 aaKnown RBP12.48□□□□□ -0.41
TRA2A-209ENST00000494255 HSD11B1LQ7Z5J1 315 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 ABI3BPQ7Z7G0 1075 aa12.48□□□□□ -0.41
TRA2A-209ENST00000494255 DCP2Q8IU60 420 aaKnown RBP12.48□□□□□ -0.41
TRA2A-209ENST00000494255 TAB3Q8N5C8 712 aaPredicted RBP12.48□□□□□ -0.41
TRA2A-209ENST00000494255 SLC25A41Q8N5S1 370 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms