RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 SLC4A1P02730 911 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 ZNF30P17039 623 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 DHPSP49366 369 aaPredicted RBP14.59□□□□□ -0.07
BRCA1-223ENST00000494123 CCR5P51681 352 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 RALGDSQ12967 914 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 SGCGQ13326 291 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 KCNJ11Q14654 390 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 PTPRRQ15256 657 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 CNGA3Q16281 694 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 IZUMO3Q5VZ72 239 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 SEL1L3Q68CR1 1132 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 LRRC66Q68CR7 880 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 PMS2CLQ68D20 193 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 CRTC1Q6UUV9 634 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 ARMCX6Q7L4S7 300 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 TSPAN33Q86UF1 283 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 ATOH1Q92858 354 aaPredicted RBP14.59□□□□□ -0.07
BRCA1-223ENST00000494123 SNF8Q96H20 258 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 HSPA12BQ96MM6 686 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 LYSMD1Q96S90 227 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 ERP44Q9BS26 406 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 GPR63Q9BZJ6 419 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 DUSP15Q9H1R2 295 aaPredicted RBP14.59□□□□□ -0.07
BRCA1-223ENST00000494123 ARNT2Q9HBZ2 717 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 PIH1D1Q9NWS0 290 aaKnown RBP14.59□□□□□ -0.07
BRCA1-223ENST00000494123 HACD3Q9P035 362 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 RAB23Q9ULC3 237 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 SHOC2Q9UQ13 582 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 ZNF711Q9Y462 761 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 FANCMQ8IYD8 2048 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 IGLON5A6NGN9 336 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 METTL12A8MUP2 240 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 AP3B1O00203 1094 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 NDC80O14777 642 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 HEXIM1O94992 359 aaKnown RBP14.59□□□□□ -0.07
BRCA1-223ENST00000494123 C6P13671 934 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 LHCGRP22888 699 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 MAGEA6P43360 314 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 ACOX1Q15067 660 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 PLK5Q496M5 336 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 SETMARQ53H47 684 aaPredicted RBP14.59□□□□□ -0.07
BRCA1-223ENST00000494123 SPDYCQ5MJ68 293 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 LIPIQ6XZB0 460 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 LYSMD3Q7Z3D4 306 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 NOA1Q8NC60 698 aaKnown RBP14.59□□□□□ -0.07
BRCA1-223ENST00000494123 KLK6Q92876 244 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 BIRC7Q96CA5 298 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 LRRC1Q9BTT6 524 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 TRABDQ9H4I3 376 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 ZFYVE1Q9HBF4 777 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 ZFR2Q9UPR6 939 aaKnown RBP14.59□□□□□ -0.07
BRCA1-223ENST00000494123 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.59□□□□□ -0.07
BRCA1-223ENST00000494123 COQ6Q9Y2Z9 468 aa14.59□□□□□ -0.07
BRCA1-223ENST00000494123 TRPM6Q9BX84 2022 aa14.58□□□□□ -0.07
BRCA1-223ENST00000494123 ABCA7Q8IZY2 2146 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 A0A0U1RQS6 177 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 TCRBV7S3A2A0A539 114 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 PSMD11O00231 422 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 CLDN7O95471 211 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 IGHV4-34P06331 123 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 TPH1P17752 444 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 GRIA1P42261 906 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 ZNF284Q2VY69 593 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 TMEM259Q4ZIN3 620 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 WDR45BQ5MNZ6 344 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 RNASEH2BQ5TBB1 312 aaKnown RBP14.58□□□□□ -0.08
BRCA1-223ENST00000494123 ANKRD22Q5VYY1 191 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 LYSMD4Q5XG99 296 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 DENND5AQ6IQ26 1287 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 GLT6D1Q7Z4J2 308 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 SLC41A1Q8IVJ1 513 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 RGL4Q8IZJ4 473 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 BBOF1Q8ND07 529 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 ZC3H10Q96K80 434 aaKnown RBP14.58□□□□□ -0.08
BRCA1-223ENST00000494123 C1QTNF7Q9BXJ2 289 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 SLC17A9Q9BYT1 436 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 DPH5Q9H2P9 285 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 CASS4Q9NQ75 786 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 SNX24Q9Y343 169 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 SPO11Q9Y5K1 396 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 SPAG17Q6Q759 2223 aa14.58□□□□□ -0.08
BRCA1-223ENST00000494123 LRRK1Q38SD2 2015 aa14.57□□□□□ -0.08
BRCA1-223ENST00000494123 GOLGA8CPA6NN73 597 aa14.57□□□□□ -0.08
BRCA1-223ENST00000494123 GOLGA8MH3BSY2 632 aa14.57□□□□□ -0.08
BRCA1-223ENST00000494123 SLC31A1O15431 190 aa14.57□□□□□ -0.08
BRCA1-223ENST00000494123 TMEM63AO94886 807 aa14.57□□□□□ -0.08
BRCA1-223ENST00000494123 CRTAMO95727 393 aa14.57□□□□□ -0.08
BRCA1-223ENST00000494123 NUDT1P36639 197 aa14.57□□□□□ -0.08
BRCA1-223ENST00000494123 PTGER3P43115 390 aa14.57□□□□□ -0.08
BRCA1-223ENST00000494123 SLC7A5Q01650 507 aa14.57□□□□□ -0.08
BRCA1-223ENST00000494123 CALCOCO2Q13137 446 aa14.57□□□□□ -0.08
BRCA1-223ENST00000494123 SEPT6Q14141 434 aa14.57□□□□□ -0.08
BRCA1-223ENST00000494123 MORF4L2Q15014 288 aa14.57□□□□□ -0.08
BRCA1-223ENST00000494123 LPAL2Q16609 132 aa14.57□□□□□ -0.08
BRCA1-223ENST00000494123 GLE1Q53GS7 698 aaKnown RBP14.57□□□□□ -0.08
BRCA1-223ENST00000494123 HOOK3Q86VS8 718 aa14.57□□□□□ -0.08
BRCA1-223ENST00000494123 NAT8LQ8N9F0 302 aa14.57□□□□□ -0.08
BRCA1-223ENST00000494123 C1QTNF2Q9BXJ5 285 aa14.57□□□□□ -0.08
BRCA1-223ENST00000494123 MIR1-1HGQ9H1L0 117 aa14.57□□□□□ -0.08
BRCA1-223ENST00000494123 XAB2Q9HCS7 855 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms